Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.36■□□□□ 0.85
Rb1P13405 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.36■□□□□ 0.85
Rb1P13405 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.36■□□□□ 0.85
Rb1P13405 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rb1P13405 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rb1P13405 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rb1P13405 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rb1P13405 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Rb1P13405 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rb1P13405 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Rb1P13405 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rb1P13405 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rb1P13405 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.34■□□□□ 0.85
Rb1P13405 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.34■□□□□ 0.85
Rb1P13405 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC20.34■□□□□ 0.85
Rb1P13405 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC20.34■□□□□ 0.85
Rb1P13405 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rb1P13405 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.34■□□□□ 0.85
Rb1P13405 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rb1P13405 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rb1P13405 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rb1P13405 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rb1P13405 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rb1P13405 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Rb1P13405 Gm8493-201ENSMUST00000196881 489 ntBASIC20.33■□□□□ 0.85
Rb1P13405 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.33■□□□□ 0.85
Rb1P13405 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Rb1P13405 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.33■□□□□ 0.84
Rb1P13405 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rb1P13405 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rb1P13405 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.32■□□□□ 0.84
Rb1P13405 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rb1P13405 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rb1P13405 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rb1P13405 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Rb1P13405 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Rb1P13405 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.32■□□□□ 0.84
Rb1P13405 Gm43017-201ENSMUST00000198296 752 ntBASIC20.32■□□□□ 0.84
Rb1P13405 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.32■□□□□ 0.84
Rb1P13405 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rb1P13405 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rb1P13405 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Rb1P13405 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rb1P13405 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rb1P13405 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rb1P13405 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Rb1P13405 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rb1P13405 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.31■□□□□ 0.84
Rb1P13405 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Rb1P13405 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.31■□□□□ 0.84
Rb1P13405 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Rb1P13405 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rb1P13405 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rb1P13405 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Rb1P13405 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rb1P13405 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rb1P13405 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Rb1P13405 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
Rb1P13405 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rb1P13405 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rb1P13405 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rb1P13405 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.29■□□□□ 0.84
Rb1P13405 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rb1P13405 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Rb1P13405 Gm7143-201ENSMUST00000222811 859 ntBASIC20.29■□□□□ 0.84
Rb1P13405 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Rb1P13405 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Rb1P13405 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.28■□□□□ 0.84
Rb1P13405 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
Rb1P13405 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Rb1P13405 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rb1P13405 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rb1P13405 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rb1P13405 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Rb1P13405 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Rb1P13405 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms