Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.09■□□□□ 0.65
Col4a2P08122 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a2P08122 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a2P08122 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC19.09■□□□□ 0.65
Col4a2P08122 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a2P08122 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a2P08122 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Col4a2P08122 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a2P08122 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a2P08122 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Col4a2P08122 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a2P08122 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.08■□□□□ 0.64
Col4a2P08122 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC19.08■□□□□ 0.64
Col4a2P08122 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Col4a2P08122 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.08■□□□□ 0.64
Col4a2P08122 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.07■□□□□ 0.64
Col4a2P08122 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.07■□□□□ 0.64
Col4a2P08122 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Col4a2P08122 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC19.07■□□□□ 0.64
Col4a2P08122 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a2P08122 AC112142.1-201ENSMUST00000228796 918 ntBASIC19.07■□□□□ 0.64
Col4a2P08122 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Col4a2P08122 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.07■□□□□ 0.64
Col4a2P08122 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Col4a2P08122 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a2P08122 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.06■□□□□ 0.64
Col4a2P08122 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.06■□□□□ 0.64
Col4a2P08122 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a2P08122 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a2P08122 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a2P08122 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.06■□□□□ 0.64
Col4a2P08122 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a2P08122 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Col4a2P08122 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col4a2P08122 Gm18671-201ENSMUST00000214826 683 ntBASIC19.05■□□□□ 0.64
Col4a2P08122 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Col4a2P08122 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.05■□□□□ 0.64
Col4a2P08122 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Col4a2P08122 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.05■□□□□ 0.64
Col4a2P08122 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Col4a2P08122 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Col4a2P08122 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a2P08122 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a2P08122 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.04■□□□□ 0.64
Col4a2P08122 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a2P08122 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Col4a2P08122 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.03■□□□□ 0.64
Col4a2P08122 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Col4a2P08122 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Col4a2P08122 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC19.03■□□□□ 0.64
Col4a2P08122 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.03■□□□□ 0.64
Col4a2P08122 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.03■□□□□ 0.64
Col4a2P08122 AV356131-201ENSMUST00000206201 750 ntBASIC19.03■□□□□ 0.64
Col4a2P08122 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Col4a2P08122 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.02■□□□□ 0.64
Col4a2P08122 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Col4a2P08122 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a2P08122 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a2P08122 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
Col4a2P08122 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a2P08122 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a2P08122 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.01■□□□□ 0.63
Col4a2P08122 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a2P08122 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a2P08122 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
Col4a2P08122 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC19.01■□□□□ 0.63
Col4a2P08122 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.01■□□□□ 0.63
Col4a2P08122 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Col4a2P08122 Gm11421-201ENSMUST00000122124 294 ntBASIC19■□□□□ 0.63
Col4a2P08122 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19■□□□□ 0.63
Col4a2P08122 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a2P08122 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Col4a2P08122 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a2P08122 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a2P08122 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19■□□□□ 0.63
Col4a2P08122 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Col4a2P08122 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Col4a2P08122 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a2P08122 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a2P08122 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a2P08122 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Col4a2P08122 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms