Protein–RNA interactions for Protein: P06336

Ig epsilon chain C region, mousemouse

Predictions only

Length 421 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06336 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
P06336 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
P06336 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
P06336 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.57■□□□□ 0.56
P06336 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.57■□□□□ 0.56
P06336 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
P06336 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
P06336 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
P06336 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.56■□□□□ 0.56
P06336 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
P06336 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.56■□□□□ 0.56
P06336 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
P06336 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
P06336 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P06336 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
P06336 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
P06336 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P06336 Gm21956-201ENSMUST00000179946 522 ntBASIC18.55■□□□□ 0.56
P06336 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.55■□□□□ 0.56
P06336 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P06336 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P06336 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
P06336 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
P06336 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
P06336 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P06336 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.54■□□□□ 0.56
P06336 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.54■□□□□ 0.56
P06336 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P06336 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P06336 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P06336 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
P06336 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P06336 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.53■□□□□ 0.56
P06336 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.53■□□□□ 0.56
P06336 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
P06336 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
P06336 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
P06336 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P06336 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
P06336 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P06336 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P06336 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P06336 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.52■□□□□ 0.56
P06336 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
P06336 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
P06336 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
P06336 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
P06336 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.51■□□□□ 0.55
P06336 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.51■□□□□ 0.55
P06336 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
P06336 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
P06336 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
P06336 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
P06336 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
P06336 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P06336 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.5■□□□□ 0.55
P06336 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
P06336 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
P06336 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
P06336 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.49■□□□□ 0.55
P06336 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
P06336 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
P06336 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P06336 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
P06336 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
P06336 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
P06336 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
P06336 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
P06336 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
P06336 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06336 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06336 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06336 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
P06336 Mir6236-201ENSMUST00000184437 123 ntBASIC18.48■□□□□ 0.55
P06336 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC18.48■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms