Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc28a2O88627 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a2O88627 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a2O88627 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.8■□□□□ 0.44
Slc28a2O88627 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Slc28a2O88627 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc28a2O88627 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.79■□□□□ 0.44
Slc28a2O88627 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a2O88627 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.79■□□□□ 0.44
Slc28a2O88627 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a2O88627 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a2O88627 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Slc28a2O88627 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a2O88627 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a2O88627 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a2O88627 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc28a2O88627 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Slc28a2O88627 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Slc28a2O88627 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a2O88627 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a2O88627 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
Slc28a2O88627 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a2O88627 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC17.78■□□□□ 0.44
Slc28a2O88627 Gm10399-202ENSMUST00000202768 748 ntBASIC17.78■□□□□ 0.44
Slc28a2O88627 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a2O88627 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
Slc28a2O88627 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.78■□□□□ 0.44
Slc28a2O88627 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc28a2O88627 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a2O88627 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Slc28a2O88627 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a2O88627 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Slc28a2O88627 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a2O88627 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a2O88627 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a2O88627 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a2O88627 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a2O88627 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc28a2O88627 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc28a2O88627 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc28a2O88627 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Slc28a2O88627 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Slc28a2O88627 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC17.76■□□□□ 0.43
Slc28a2O88627 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Slc28a2O88627 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Slc28a2O88627 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a2O88627 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.75■□□□□ 0.43
Slc28a2O88627 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a2O88627 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Slc28a2O88627 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a2O88627 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC17.75■□□□□ 0.43
Slc28a2O88627 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc28a2O88627 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.75■□□□□ 0.43
Slc28a2O88627 Gm18755-201ENSMUST00000218030 1099 ntBASIC17.75■□□□□ 0.43
Slc28a2O88627 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a2O88627 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.75■□□□□ 0.43
Slc28a2O88627 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Slc28a2O88627 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a2O88627 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc28a2O88627 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a2O88627 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
Slc28a2O88627 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Slc28a2O88627 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a2O88627 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a2O88627 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a2O88627 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.74■□□□□ 0.43
Slc28a2O88627 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Slc28a2O88627 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a2O88627 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a2O88627 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc28a2O88627 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.74■□□□□ 0.43
Slc28a2O88627 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.73■□□□□ 0.43
Slc28a2O88627 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a2O88627 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a2O88627 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.73■□□□□ 0.43
Slc28a2O88627 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC17.73■□□□□ 0.43
Slc28a2O88627 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a2O88627 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.73■□□□□ 0.43
Slc28a2O88627 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
Slc28a2O88627 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a2O88627 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slc28a2O88627 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc28a2O88627 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.73■□□□□ 0.43
Slc28a2O88627 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a2O88627 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a2O88627 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a2O88627 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a2O88627 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a2O88627 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc28a2O88627 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms