Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.19■□□□□ 0.34
Cldn1O88551 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cldn1O88551 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn1O88551 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn1O88551 Gm18671-201ENSMUST00000214826 683 ntBASIC17.18■□□□□ 0.34
Cldn1O88551 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn1O88551 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn1O88551 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cldn1O88551 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Cldn1O88551 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cldn1O88551 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.17■□□□□ 0.34
Cldn1O88551 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.17■□□□□ 0.34
Cldn1O88551 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cldn1O88551 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Cldn1O88551 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldn1O88551 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn1O88551 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.16■□□□□ 0.34
Cldn1O88551 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.16■□□□□ 0.34
Cldn1O88551 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn1O88551 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn1O88551 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.16■□□□□ 0.34
Cldn1O88551 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn1O88551 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn1O88551 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn1O88551 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn1O88551 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cldn1O88551 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cldn1O88551 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn1O88551 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cldn1O88551 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn1O88551 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn1O88551 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.15■□□□□ 0.34
Cldn1O88551 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.15■□□□□ 0.34
Cldn1O88551 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.15■□□□□ 0.34
Cldn1O88551 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.15■□□□□ 0.34
Cldn1O88551 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn1O88551 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn1O88551 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn1O88551 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn1O88551 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Cldn1O88551 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn1O88551 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cldn1O88551 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn1O88551 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.14■□□□□ 0.33
Cldn1O88551 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn1O88551 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.14■□□□□ 0.33
Cldn1O88551 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Cldn1O88551 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC17.14■□□□□ 0.33
Cldn1O88551 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn1O88551 AV356131-201ENSMUST00000206201 750 ntBASIC17.14■□□□□ 0.33
Cldn1O88551 Gm10033-202ENSMUST00000211874 928 ntBASIC17.14■□□□□ 0.33
Cldn1O88551 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cldn1O88551 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cldn1O88551 Notumos-201ENSMUST00000151998 2659 ntBASIC17.14■□□□□ 0.33
Cldn1O88551 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cldn1O88551 Gm13042-201ENSMUST00000119244 1955 ntBASIC17.13■□□□□ 0.33
Cldn1O88551 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.13■□□□□ 0.33
Cldn1O88551 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cldn1O88551 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cldn1O88551 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Cldn1O88551 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cldn1O88551 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn1O88551 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn1O88551 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Cldn1O88551 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn1O88551 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn1O88551 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn1O88551 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.12■□□□□ 0.33
Cldn1O88551 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cldn1O88551 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn1O88551 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cldn1O88551 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cldn1O88551 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC17.11■□□□□ 0.33
Cldn1O88551 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms