Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
Pcdh12O55134 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Pcdh12O55134 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Pcdh12O55134 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.18■□□□□ 0.5
Pcdh12O55134 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.18■□□□□ 0.5
Pcdh12O55134 Gm9870-201ENSMUST00000063874 645 ntBASIC18.18■□□□□ 0.5
Pcdh12O55134 Gm13241-201ENSMUST00000094493 780 ntBASIC18.18■□□□□ 0.5
Pcdh12O55134 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Pcdh12O55134 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh12O55134 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh12O55134 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh12O55134 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh12O55134 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh12O55134 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Pcdh12O55134 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh12O55134 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh12O55134 Golph3-202ENSMUST00000226517 2359 ntBASIC18.17■□□□□ 0.5
Pcdh12O55134 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh12O55134 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh12O55134 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh12O55134 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.17■□□□□ 0.5
Pcdh12O55134 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Pcdh12O55134 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh12O55134 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
Pcdh12O55134 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Pcdh12O55134 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh12O55134 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh12O55134 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Pcdh12O55134 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdh12O55134 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Pcdh12O55134 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
Pcdh12O55134 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Pcdh12O55134 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Pcdh12O55134 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh12O55134 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh12O55134 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh12O55134 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh12O55134 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh12O55134 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.15■□□□□ 0.5
Pcdh12O55134 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC18.15■□□□□ 0.5
Pcdh12O55134 Gm7143-201ENSMUST00000222811 859 ntBASIC18.15■□□□□ 0.5
Pcdh12O55134 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh12O55134 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.15■□□□□ 0.5
Pcdh12O55134 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh12O55134 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Pcdh12O55134 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdh12O55134 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Pcdh12O55134 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh12O55134 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh12O55134 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.14■□□□□ 0.49
Pcdh12O55134 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh12O55134 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh12O55134 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh12O55134 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdh12O55134 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Pcdh12O55134 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh12O55134 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Pcdh12O55134 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh12O55134 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh12O55134 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh12O55134 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh12O55134 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Pcdh12O55134 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC18.13■□□□□ 0.49
Pcdh12O55134 Golgb1-201ENSMUST00000023534 498 ntBASIC18.13■□□□□ 0.49
Pcdh12O55134 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh12O55134 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh12O55134 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.13■□□□□ 0.49
Pcdh12O55134 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Pcdh12O55134 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh12O55134 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh12O55134 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Pcdh12O55134 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh12O55134 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh12O55134 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Pcdh12O55134 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.12■□□□□ 0.49
Pcdh12O55134 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.12■□□□□ 0.49
Pcdh12O55134 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Pcdh12O55134 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.12■□□□□ 0.49
Pcdh12O55134 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Pcdh12O55134 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC18.12■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 53.7 ms