Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Banf1O54962 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Banf1O54962 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Banf1O54962 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Banf1O54962 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.5■□□□□ 0.87
Banf1O54962 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Banf1O54962 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Banf1O54962 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Banf1O54962 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Banf1O54962 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Banf1O54962 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Banf1O54962 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Banf1O54962 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Banf1O54962 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Banf1O54962 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Banf1O54962 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Banf1O54962 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Banf1O54962 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Banf1O54962 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Banf1O54962 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Banf1O54962 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Banf1O54962 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Banf1O54962 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.48■□□□□ 0.87
Banf1O54962 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Banf1O54962 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Banf1O54962 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Banf1O54962 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Banf1O54962 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.47■□□□□ 0.87
Banf1O54962 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Banf1O54962 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Banf1O54962 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Banf1O54962 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Banf1O54962 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Banf1O54962 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Banf1O54962 Gm10399-202ENSMUST00000202768 748 ntBASIC20.46■□□□□ 0.87
Banf1O54962 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Banf1O54962 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Banf1O54962 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Banf1O54962 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Banf1O54962 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Banf1O54962 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Banf1O54962 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.45■□□□□ 0.86
Banf1O54962 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.45■□□□□ 0.86
Banf1O54962 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Banf1O54962 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Banf1O54962 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Banf1O54962 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Banf1O54962 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.45■□□□□ 0.86
Banf1O54962 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Banf1O54962 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Banf1O54962 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Banf1O54962 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Banf1O54962 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Banf1O54962 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.44■□□□□ 0.86
Banf1O54962 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Banf1O54962 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Banf1O54962 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Banf1O54962 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Banf1O54962 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Banf1O54962 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Banf1O54962 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Banf1O54962 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Banf1O54962 Gm10232-201ENSMUST00000089221 720 ntBASIC20.43■□□□□ 0.86
Banf1O54962 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Banf1O54962 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Banf1O54962 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.43■□□□□ 0.86
Banf1O54962 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Banf1O54962 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Banf1O54962 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Banf1O54962 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Banf1O54962 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Banf1O54962 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.41■□□□□ 0.86
Banf1O54962 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.41■□□□□ 0.86
Banf1O54962 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Banf1O54962 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Banf1O54962 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Banf1O54962 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Banf1O54962 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Banf1O54962 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.41■□□□□ 0.86
Banf1O54962 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Banf1O54962 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Banf1O54962 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Banf1O54962 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Banf1O54962 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC20.4■□□□□ 0.86
Banf1O54962 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Banf1O54962 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Banf1O54962 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.4■□□□□ 0.86
Banf1O54962 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.4■□□□□ 0.86
Banf1O54962 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Banf1O54962 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Banf1O54962 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms