Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
ChkaO54804 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
ChkaO54804 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Gm5812-201ENSMUST00000061073 957 ntBASIC20.35■□□□□ 0.85
ChkaO54804 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ChkaO54804 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ChkaO54804 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ChkaO54804 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
ChkaO54804 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
ChkaO54804 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.33■□□□□ 0.85
ChkaO54804 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ChkaO54804 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ChkaO54804 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.32■□□□□ 0.84
ChkaO54804 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.32■□□□□ 0.84
ChkaO54804 Gm7143-201ENSMUST00000222811 859 ntBASIC20.32■□□□□ 0.84
ChkaO54804 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ChkaO54804 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.32■□□□□ 0.84
ChkaO54804 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ChkaO54804 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ChkaO54804 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ChkaO54804 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
ChkaO54804 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.31■□□□□ 0.84
ChkaO54804 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ChkaO54804 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
ChkaO54804 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
ChkaO54804 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ChkaO54804 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.3■□□□□ 0.84
ChkaO54804 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ChkaO54804 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
ChkaO54804 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ChkaO54804 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ChkaO54804 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
ChkaO54804 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.29■□□□□ 0.84
ChkaO54804 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ChkaO54804 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ChkaO54804 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ChkaO54804 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.29■□□□□ 0.84
ChkaO54804 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
ChkaO54804 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ChkaO54804 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ChkaO54804 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ChkaO54804 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ChkaO54804 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.28■□□□□ 0.84
ChkaO54804 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ChkaO54804 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ChkaO54804 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ChkaO54804 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
ChkaO54804 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.28■□□□□ 0.84
ChkaO54804 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ChkaO54804 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
ChkaO54804 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ChkaO54804 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.27■□□□□ 0.84
ChkaO54804 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ChkaO54804 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ChkaO54804 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ChkaO54804 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
ChkaO54804 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ChkaO54804 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
ChkaO54804 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
ChkaO54804 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ChkaO54804 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ChkaO54804 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ChkaO54804 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ChkaO54804 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
ChkaO54804 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
ChkaO54804 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
ChkaO54804 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ChkaO54804 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
ChkaO54804 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ChkaO54804 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.25■□□□□ 0.83
ChkaO54804 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 12.1 ms