Protein–RNA interactions for Protein: O35652

Lhx8, LIM/homeobox protein Lhx8, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx8O35652 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx8O35652 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx8O35652 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.34■□□□□ 0.69
Lhx8O35652 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx8O35652 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.34■□□□□ 0.69
Lhx8O35652 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Lhx8O35652 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx8O35652 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC19.34■□□□□ 0.69
Lhx8O35652 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx8O35652 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lhx8O35652 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lhx8O35652 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx8O35652 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx8O35652 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx8O35652 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx8O35652 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.33■□□□□ 0.69
Lhx8O35652 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lhx8O35652 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.33■□□□□ 0.68
Lhx8O35652 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.33■□□□□ 0.68
Lhx8O35652 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC19.33■□□□□ 0.68
Lhx8O35652 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx8O35652 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx8O35652 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx8O35652 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx8O35652 Iqck-206ENSMUST00000208658 2891 ntBASIC19.33■□□□□ 0.68
Lhx8O35652 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx8O35652 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lhx8O35652 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx8O35652 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx8O35652 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx8O35652 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
Lhx8O35652 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lhx8O35652 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.31■□□□□ 0.68
Lhx8O35652 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lhx8O35652 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.31■□□□□ 0.68
Lhx8O35652 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Lhx8O35652 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lhx8O35652 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lhx8O35652 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx8O35652 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Lhx8O35652 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.3■□□□□ 0.68
Lhx8O35652 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx8O35652 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.3■□□□□ 0.68
Lhx8O35652 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx8O35652 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Lhx8O35652 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.3■□□□□ 0.68
Lhx8O35652 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.3■□□□□ 0.68
Lhx8O35652 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx8O35652 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx8O35652 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx8O35652 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lhx8O35652 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx8O35652 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx8O35652 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx8O35652 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx8O35652 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lhx8O35652 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx8O35652 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx8O35652 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC19.29■□□□□ 0.68
Lhx8O35652 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx8O35652 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lhx8O35652 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.29■□□□□ 0.68
Lhx8O35652 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Lhx8O35652 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lhx8O35652 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lhx8O35652 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.29■□□□□ 0.68
Lhx8O35652 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx8O35652 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx8O35652 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Lhx8O35652 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx8O35652 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Lhx8O35652 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx8O35652 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx8O35652 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC19.28■□□□□ 0.68
Lhx8O35652 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lhx8O35652 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx8O35652 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx8O35652 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Lhx8O35652 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.27■□□□□ 0.68
Lhx8O35652 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx8O35652 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx8O35652 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx8O35652 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx8O35652 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lhx8O35652 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Lhx8O35652 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.27■□□□□ 0.68
Lhx8O35652 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lhx8O35652 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx8O35652 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lhx8O35652 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.26■□□□□ 0.67
Lhx8O35652 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 85.2 ms