Protein–RNA interactions for Protein: O35646

Capn6, Calpain-6, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn6O35646 Gm10399-202ENSMUST00000202768 748 ntBASIC20.54■□□□□ 0.88
Capn6O35646 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Capn6O35646 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capn6O35646 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capn6O35646 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capn6O35646 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capn6O35646 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Capn6O35646 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Capn6O35646 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Capn6O35646 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Capn6O35646 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Capn6O35646 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capn6O35646 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Capn6O35646 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Capn6O35646 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capn6O35646 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capn6O35646 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Capn6O35646 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Capn6O35646 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn6O35646 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn6O35646 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn6O35646 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn6O35646 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Capn6O35646 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn6O35646 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Capn6O35646 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.51■□□□□ 0.87
Capn6O35646 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.51■□□□□ 0.87
Capn6O35646 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Capn6O35646 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Capn6O35646 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Capn6O35646 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.5■□□□□ 0.87
Capn6O35646 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capn6O35646 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.49■□□□□ 0.87
Capn6O35646 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
Capn6O35646 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capn6O35646 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Capn6O35646 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.49■□□□□ 0.87
Capn6O35646 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capn6O35646 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Capn6O35646 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capn6O35646 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.49■□□□□ 0.87
Capn6O35646 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Capn6O35646 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.49■□□□□ 0.87
Capn6O35646 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
Capn6O35646 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Capn6O35646 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Capn6O35646 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capn6O35646 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capn6O35646 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Capn6O35646 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Capn6O35646 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.47■□□□□ 0.87
Capn6O35646 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.47■□□□□ 0.87
Capn6O35646 Gm10232-201ENSMUST00000089221 720 ntBASIC20.47■□□□□ 0.87
Capn6O35646 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Capn6O35646 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capn6O35646 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capn6O35646 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capn6O35646 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capn6O35646 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Capn6O35646 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.46■□□□□ 0.87
Capn6O35646 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Capn6O35646 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Capn6O35646 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Capn6O35646 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Capn6O35646 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Capn6O35646 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC20.46■□□□□ 0.87
Capn6O35646 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Capn6O35646 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Capn6O35646 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Capn6O35646 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn6O35646 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Capn6O35646 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn6O35646 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
Capn6O35646 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn6O35646 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.45■□□□□ 0.86
Capn6O35646 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC20.45■□□□□ 0.86
Capn6O35646 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn6O35646 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Capn6O35646 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
Capn6O35646 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn6O35646 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn6O35646 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn6O35646 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.44■□□□□ 0.86
Capn6O35646 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Capn6O35646 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Capn6O35646 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Capn6O35646 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Capn6O35646 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Capn6O35646 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Capn6O35646 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Capn6O35646 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms