Protein–RNA interactions for Protein: O35493

Clk4, Dual specificity protein kinase CLK4, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk4O35493 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clk4O35493 Gm13241-201ENSMUST00000094493 780 ntBASIC19.21■□□□□ 0.67
Clk4O35493 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clk4O35493 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Clk4O35493 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Clk4O35493 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Clk4O35493 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.2■□□□□ 0.66
Clk4O35493 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk4O35493 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk4O35493 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk4O35493 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk4O35493 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clk4O35493 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clk4O35493 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Clk4O35493 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk4O35493 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Clk4O35493 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Clk4O35493 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.2■□□□□ 0.66
Clk4O35493 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk4O35493 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk4O35493 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk4O35493 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk4O35493 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk4O35493 Golgb1-201ENSMUST00000023534 498 ntBASIC19.19■□□□□ 0.66
Clk4O35493 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Clk4O35493 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.19■□□□□ 0.66
Clk4O35493 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.19■□□□□ 0.66
Clk4O35493 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Clk4O35493 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Clk4O35493 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk4O35493 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk4O35493 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk4O35493 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk4O35493 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk4O35493 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.18■□□□□ 0.66
Clk4O35493 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.18■□□□□ 0.66
Clk4O35493 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk4O35493 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Clk4O35493 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Clk4O35493 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk4O35493 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk4O35493 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk4O35493 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk4O35493 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk4O35493 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.17■□□□□ 0.66
Clk4O35493 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk4O35493 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Clk4O35493 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Clk4O35493 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk4O35493 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk4O35493 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Clk4O35493 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.16■□□□□ 0.66
Clk4O35493 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clk4O35493 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clk4O35493 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
Clk4O35493 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Clk4O35493 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.15■□□□□ 0.66
Clk4O35493 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
Clk4O35493 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clk4O35493 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk4O35493 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clk4O35493 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk4O35493 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Clk4O35493 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Clk4O35493 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk4O35493 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk4O35493 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clk4O35493 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clk4O35493 Gm43530-201ENSMUST00000195920 274 ntBASIC19.13■□□□□ 0.65
Clk4O35493 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.13■□□□□ 0.65
Clk4O35493 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clk4O35493 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
Clk4O35493 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk4O35493 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk4O35493 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clk4O35493 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
Clk4O35493 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Clk4O35493 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms