Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.48■□□□□ 0.87
Tnfrsf11bO08712 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11bO08712 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11bO08712 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11bO08712 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11bO08712 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Tnfrsf11bO08712 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf11bO08712 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf11bO08712 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf11bO08712 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tnfrsf11bO08712 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Tnfrsf11bO08712 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11bO08712 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11bO08712 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11bO08712 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.46■□□□□ 0.87
Tnfrsf11bO08712 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11bO08712 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11bO08712 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf11bO08712 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Tnfrsf11bO08712 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.45■□□□□ 0.86
Tnfrsf11bO08712 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.44■□□□□ 0.86
Tnfrsf11bO08712 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11bO08712 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11bO08712 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11bO08712 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11bO08712 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.44■□□□□ 0.86
Tnfrsf11bO08712 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf11bO08712 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Tnfrsf11bO08712 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11bO08712 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11bO08712 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11bO08712 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tnfrsf11bO08712 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.42■□□□□ 0.86
Tnfrsf11bO08712 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tnfrsf11bO08712 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf11bO08712 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Tnfrsf11bO08712 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tnfrsf11bO08712 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tnfrsf11bO08712 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfrsf11bO08712 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfrsf11bO08712 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfrsf11bO08712 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfrsf11bO08712 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tnfrsf11bO08712 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11bO08712 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tnfrsf11bO08712 Gm15820-201ENSMUST00000201566 728 ntBASIC20.39■□□□□ 0.85
Tnfrsf11bO08712 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Tnfrsf11bO08712 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11bO08712 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11bO08712 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.38■□□□□ 0.85
Tnfrsf11bO08712 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11bO08712 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Tnfrsf11bO08712 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tnfrsf11bO08712 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms