Protein–RNA interactions for Protein: O08641

Sh3yl1, SH3 domain-containing YSC84-like protein 1, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3yl1O08641 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sh3yl1O08641 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.08■□□□□ 0.64
Sh3yl1O08641 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Gm12922-201ENSMUST00000120626 809 ntBASIC19.07■□□□□ 0.64
Sh3yl1O08641 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Gm9870-201ENSMUST00000063874 645 ntBASIC19.07■□□□□ 0.64
Sh3yl1O08641 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sh3yl1O08641 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3yl1O08641 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3yl1O08641 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3yl1O08641 Gm21956-201ENSMUST00000179946 522 ntBASIC19.06■□□□□ 0.64
Sh3yl1O08641 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3yl1O08641 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Sh3yl1O08641 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Sh3yl1O08641 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sh3yl1O08641 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Sh3yl1O08641 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 Gm13241-201ENSMUST00000094493 780 ntBASIC19.05■□□□□ 0.64
Sh3yl1O08641 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sh3yl1O08641 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
Sh3yl1O08641 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.05■□□□□ 0.64
Sh3yl1O08641 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3yl1O08641 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3yl1O08641 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3yl1O08641 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3yl1O08641 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3yl1O08641 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.04■□□□□ 0.64
Sh3yl1O08641 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
Sh3yl1O08641 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC19.04■□□□□ 0.64
Sh3yl1O08641 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3yl1O08641 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sh3yl1O08641 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Golgb1-201ENSMUST00000023534 498 ntBASIC19.03■□□□□ 0.64
Sh3yl1O08641 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sh3yl1O08641 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3yl1O08641 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3yl1O08641 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
Sh3yl1O08641 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3yl1O08641 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3yl1O08641 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3yl1O08641 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sh3yl1O08641 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sh3yl1O08641 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3yl1O08641 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3yl1O08641 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3yl1O08641 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3yl1O08641 Gm7143-201ENSMUST00000222811 859 ntBASIC19.01■□□□□ 0.63
Sh3yl1O08641 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.01■□□□□ 0.63
Sh3yl1O08641 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3yl1O08641 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.01■□□□□ 0.63
Sh3yl1O08641 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sh3yl1O08641 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Sh3yl1O08641 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19■□□□□ 0.63
Sh3yl1O08641 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
Sh3yl1O08641 AC140930.3-201ENSMUST00000222935 274 ntBASIC19■□□□□ 0.63
Sh3yl1O08641 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
Sh3yl1O08641 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sh3yl1O08641 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3yl1O08641 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3yl1O08641 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sh3yl1O08641 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.99■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms