Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Pcdh9F8VPK8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdh9F8VPK8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdh9F8VPK8 Gm15820-201ENSMUST00000201566 728 ntBASIC20.65■□□□□ 0.9
Pcdh9F8VPK8 Gm18755-201ENSMUST00000218030 1099 ntBASIC20.65■□□□□ 0.9
Pcdh9F8VPK8 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdh9F8VPK8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdh9F8VPK8 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Gm7143-201ENSMUST00000222811 859 ntBASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdh9F8VPK8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdh9F8VPK8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Gm15546-201ENSMUST00000122095 826 ntBASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdh9F8VPK8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdh9F8VPK8 Golph3-202ENSMUST00000226517 2359 ntBASIC20.6■□□□□ 0.89
Pcdh9F8VPK8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdh9F8VPK8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh9F8VPK8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh9F8VPK8 Gm40881-201ENSMUST00000223397 166 ntBASIC20.6■□□□□ 0.89
Pcdh9F8VPK8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdh9F8VPK8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh9F8VPK8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdh9F8VPK8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdh9F8VPK8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdh9F8VPK8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.58■□□□□ 0.88
Pcdh9F8VPK8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdh9F8VPK8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.58■□□□□ 0.88
Pcdh9F8VPK8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdh9F8VPK8 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms