Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf4lE9Q2N0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Cpsf4lE9Q2N0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Cpsf4lE9Q2N0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4lE9Q2N0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4lE9Q2N0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4lE9Q2N0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Cpsf4lE9Q2N0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Cpsf4lE9Q2N0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Cpsf4lE9Q2N0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
Cpsf4lE9Q2N0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Cpsf4lE9Q2N0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.02■□□□□ 0.32
Cpsf4lE9Q2N0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Cpsf4lE9Q2N0 Gm21956-201ENSMUST00000179946 522 ntBASIC17.02■□□□□ 0.32
Cpsf4lE9Q2N0 Mir6236-201ENSMUST00000184437 123 ntBASIC17.02■□□□□ 0.32
Cpsf4lE9Q2N0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC17.02■□□□□ 0.32
Cpsf4lE9Q2N0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cpsf4lE9Q2N0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpsf4lE9Q2N0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpsf4lE9Q2N0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Cpsf4lE9Q2N0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
Cpsf4lE9Q2N0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Gm9207-201ENSMUST00000198773 1115 ntBASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Gm13241-201ENSMUST00000094493 780 ntBASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
Cpsf4lE9Q2N0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Gm43759-201ENSMUST00000196925 1261 ntBASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cpsf4lE9Q2N0 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cpsf4lE9Q2N0 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms