Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Gm15820-201ENSMUST00000201566 728 ntBASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Gm28043E0CXC2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28043E0CXC2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28043E0CXC2 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28043E0CXC2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28043E0CXC2 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.02■□□□□ 0.8
Gm28043E0CXC2 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm28043E0CXC2 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Gm28043E0CXC2 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Gm28043E0CXC2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Gm28043E0CXC2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20■□□□□ 0.79
Gm28043E0CXC2 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28043E0CXC2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28043E0CXC2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
Gm28043E0CXC2 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gm28043E0CXC2 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28043E0CXC2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28043E0CXC2 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28043E0CXC2 Snhg20-203ENSMUST00000182811 2153 ntBASIC20■□□□□ 0.79
Gm28043E0CXC2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm28043E0CXC2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm28043E0CXC2 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.99■□□□□ 0.79
Gm28043E0CXC2 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.98■□□□□ 0.79
Gm28043E0CXC2 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28043E0CXC2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Gm28043E0CXC2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28043E0CXC2 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28043E0CXC2 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28043E0CXC2 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.98■□□□□ 0.79
Gm28043E0CXC2 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm28043E0CXC2 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Gm28043E0CXC2 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.97■□□□□ 0.79
Gm28043E0CXC2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28043E0CXC2 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28043E0CXC2 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28043E0CXC2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm28043E0CXC2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
Gm28043E0CXC2 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm28043E0CXC2 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28043E0CXC2 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Gm40881-201ENSMUST00000223397 166 ntBASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Gm28043E0CXC2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm28043E0CXC2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms