Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.3■■□□□ 1
Rfx8D3YU81 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.3■■□□□ 1
Rfx8D3YU81 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.3■■□□□ 1
Rfx8D3YU81 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
Rfx8D3YU81 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx8D3YU81 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx8D3YU81 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx8D3YU81 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
Rfx8D3YU81 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx8D3YU81 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx8D3YU81 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
Rfx8D3YU81 Gm9847-201ENSMUST00000052528 599 ntBASIC21.29■■□□□ 1
Rfx8D3YU81 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfx8D3YU81 Gm34220-201ENSMUST00000223001 2709 ntBASIC21.28■■□□□ 1
Rfx8D3YU81 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx8D3YU81 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx8D3YU81 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC21.28■■□□□ 1
Rfx8D3YU81 Gm43530-201ENSMUST00000195920 274 ntBASIC21.28■■□□□ 1
Rfx8D3YU81 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx8D3YU81 Golgb1-201ENSMUST00000023534 498 ntBASIC21.28■■□□□ 1
Rfx8D3YU81 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC21.28■■□□□ 1
Rfx8D3YU81 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfx8D3YU81 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx8D3YU81 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx8D3YU81 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rfx8D3YU81 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx8D3YU81 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx8D3YU81 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx8D3YU81 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
Rfx8D3YU81 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx8D3YU81 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfx8D3YU81 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rfx8D3YU81 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.27■□□□□ 0.99
Rfx8D3YU81 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rfx8D3YU81 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfx8D3YU81 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.24■□□□□ 0.99
Rfx8D3YU81 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfx8D3YU81 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rfx8D3YU81 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx8D3YU81 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx8D3YU81 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx8D3YU81 Gm13241-201ENSMUST00000094493 780 ntBASIC21.22■□□□□ 0.99
Rfx8D3YU81 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx8D3YU81 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx8D3YU81 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx8D3YU81 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx8D3YU81 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfx8D3YU81 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx8D3YU81 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rfx8D3YU81 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx8D3YU81 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.21■□□□□ 0.99
Rfx8D3YU81 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx8D3YU81 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx8D3YU81 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.21■□□□□ 0.99
Rfx8D3YU81 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rfx8D3YU81 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx8D3YU81 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx8D3YU81 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rfx8D3YU81 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms