Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Col6a4A2AX52 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Col6a4A2AX52 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Col6a4A2AX52 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.96■□□□□ 0.3
Col6a4A2AX52 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a4A2AX52 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.96■□□□□ 0.3
Col6a4A2AX52 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Col6a4A2AX52 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.95■□□□□ 0.3
Col6a4A2AX52 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Reep4-203ENSMUST00000226563 1444 ntBASIC16.95■□□□□ 0.3
Col6a4A2AX52 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.95■□□□□ 0.3
Col6a4A2AX52 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Col6a4A2AX52 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Gm11421-201ENSMUST00000122124 294 ntBASIC16.93■□□□□ 0.3
Col6a4A2AX52 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Col6a4A2AX52 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a4A2AX52 Gm14281-201ENSMUST00000121700 1294 ntBASIC16.92■□□□□ 0.3
Col6a4A2AX52 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.92■□□□□ 0.3
Col6a4A2AX52 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a4A2AX52 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a4A2AX52 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Col6a4A2AX52 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.92■□□□□ 0.3
Col6a4A2AX52 Gm12441-201ENSMUST00000121806 588 ntBASIC16.92■□□□□ 0.3
Col6a4A2AX52 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC16.92■□□□□ 0.3
Col6a4A2AX52 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Col6a4A2AX52 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Col6a4A2AX52 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC16.91■□□□□ 0.3
Col6a4A2AX52 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms