Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IsxA1A546 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
IsxA1A546 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.65■□□□□ 0.58
IsxA1A546 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
IsxA1A546 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IsxA1A546 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
IsxA1A546 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
IsxA1A546 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IsxA1A546 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
IsxA1A546 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IsxA1A546 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IsxA1A546 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
IsxA1A546 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.64■□□□□ 0.57
IsxA1A546 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
IsxA1A546 Gm38342-201ENSMUST00000195710 2980 ntBASIC18.63■□□□□ 0.57
IsxA1A546 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
IsxA1A546 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IsxA1A546 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
IsxA1A546 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC18.63■□□□□ 0.57
IsxA1A546 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
IsxA1A546 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.63■□□□□ 0.57
IsxA1A546 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.63■□□□□ 0.57
IsxA1A546 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
IsxA1A546 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
IsxA1A546 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
IsxA1A546 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IsxA1A546 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IsxA1A546 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IsxA1A546 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
IsxA1A546 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
IsxA1A546 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
IsxA1A546 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC18.61■□□□□ 0.57
IsxA1A546 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC18.61■□□□□ 0.57
IsxA1A546 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC18.61■□□□□ 0.57
IsxA1A546 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.61■□□□□ 0.57
IsxA1A546 AC117769.4-201ENSMUST00000225679 685 ntBASIC18.61■□□□□ 0.57
IsxA1A546 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
IsxA1A546 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.61■□□□□ 0.57
IsxA1A546 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
IsxA1A546 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IsxA1A546 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IsxA1A546 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IsxA1A546 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
IsxA1A546 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IsxA1A546 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IsxA1A546 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC18.6■□□□□ 0.57
IsxA1A546 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IsxA1A546 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
IsxA1A546 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
IsxA1A546 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IsxA1A546 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IsxA1A546 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.59■□□□□ 0.57
IsxA1A546 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.59■□□□□ 0.57
IsxA1A546 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
IsxA1A546 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
IsxA1A546 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
IsxA1A546 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
IsxA1A546 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC18.58■□□□□ 0.56
IsxA1A546 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
IsxA1A546 Gm44428-201ENSMUST00000204474 874 ntBASIC18.58■□□□□ 0.56
IsxA1A546 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IsxA1A546 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IsxA1A546 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
IsxA1A546 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
IsxA1A546 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IsxA1A546 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.57■□□□□ 0.56
IsxA1A546 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC18.57■□□□□ 0.56
IsxA1A546 Gm12366-201ENSMUST00000121722 873 ntBASIC18.57■□□□□ 0.56
IsxA1A546 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC18.57■□□□□ 0.56
IsxA1A546 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC18.57■□□□□ 0.56
IsxA1A546 Gm5786-201ENSMUST00000085368 882 ntBASIC18.57■□□□□ 0.56
IsxA1A546 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
IsxA1A546 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IsxA1A546 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
IsxA1A546 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IsxA1A546 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
IsxA1A546 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
IsxA1A546 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC18.56■□□□□ 0.56
IsxA1A546 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.56■□□□□ 0.56
IsxA1A546 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.56■□□□□ 0.56
IsxA1A546 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
IsxA1A546 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IsxA1A546 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
IsxA1A546 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 1289.7 ms