Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trav23A0A0G2JG17 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Gm44949-201ENSMUST00000206423 1450 ntBASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Hsf1-207ENSMUST00000228371 2102 ntBASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Gm42900-201ENSMUST00000197184 2167 ntBASIC16.36■□□□□ 0.21
Trav23A0A0G2JG17 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Gm9870-201ENSMUST00000063874 645 ntBASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trav23A0A0G2JG17 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav23A0A0G2JG17 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Trav23A0A0G2JG17 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC16.34■□□□□ 0.21
Trav23A0A0G2JG17 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC16.34■□□□□ 0.21
Trav23A0A0G2JG17 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav23A0A0G2JG17 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav23A0A0G2JG17 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav23A0A0G2JG17 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trav23A0A0G2JG17 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav23A0A0G2JG17 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Trav23A0A0G2JG17 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Trav23A0A0G2JG17 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Trav23A0A0G2JG17 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Gm13241-201ENSMUST00000094493 780 ntBASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Trav23A0A0G2JG17 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Gm43006-201ENSMUST00000197702 1602 ntBASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Gm12922-201ENSMUST00000120626 809 ntBASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
Trav23A0A0G2JG17 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Gm7143-201ENSMUST00000222811 859 ntBASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Golgb1-201ENSMUST00000023534 498 ntBASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Trav23A0A0G2JG17 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trav23A0A0G2JG17 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms