Protein–RNA interactions for Protein: A0A0G2JG01

Trav13n-4, T cell receptor alpha variable 13N-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-4A0A0G2JG01 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Serp2-204ENSMUST00000228055 705 ntBASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
Trav13n-4A0A0G2JG01 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Trav13n-4A0A0G2JG01 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Trav13n-4A0A0G2JG01 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Trav13n-4A0A0G2JG01 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC16.18■□□□□ 0.18
Trav13n-4A0A0G2JG01 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Trav13n-4A0A0G2JG01 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gm5913-201ENSMUST00000119397 1399 ntBASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Trav13n-4A0A0G2JG01 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gm27454-201ENSMUST00000185090 204 ntBASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Trav13n-4A0A0G2JG01 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 301.3 ms