Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav9-4A0A0B4J1K2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Golgb1-201ENSMUST00000023534 498 ntBASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav9-4A0A0B4J1K2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Gm9847-201ENSMUST00000052528 599 ntBASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav9-4A0A0B4J1K2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9-4A0A0B4J1K2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Trav9-4A0A0B4J1K2 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC15.05■□□□□ 0
Trav9-4A0A0B4J1K2 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Gm12922-201ENSMUST00000120626 809 ntBASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Gm43530-201ENSMUST00000195920 274 ntBASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav9-4A0A0B4J1K2 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC15.04■□□□□ -0
Trav9-4A0A0B4J1K2 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav9-4A0A0B4J1K2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC15.02■□□□□ -0
Trav9-4A0A0B4J1K2 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9-4A0A0B4J1K2 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav9-4A0A0B4J1K2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-4A0A0B4J1K2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC15.01□□□□□ -0.01
Trav9-4A0A0B4J1K2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-4A0A0B4J1K2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-4A0A0B4J1K2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav9-4A0A0B4J1K2 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms