Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv20A0A0B4J1H5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv20A0A0B4J1H5 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv20A0A0B4J1H5 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Gm43909-201ENSMUST00000203443 1876 ntBASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Trbv20A0A0B4J1H5 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18■□□□□ 0.47
Trbv20A0A0B4J1H5 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Trbv20A0A0B4J1H5 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv20A0A0B4J1H5 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv20A0A0B4J1H5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv20A0A0B4J1H5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Trbv20A0A0B4J1H5 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv20A0A0B4J1H5 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.96■□□□□ 0.47
Trbv20A0A0B4J1H5 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.47
Trbv20A0A0B4J1H5 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv20A0A0B4J1H5 Gm11687-201ENSMUST00000118911 886 ntBASIC17.96■□□□□ 0.47
Trbv20A0A0B4J1H5 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
Trbv20A0A0B4J1H5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Trbv20A0A0B4J1H5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv20A0A0B4J1H5 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trbv20A0A0B4J1H5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trbv20A0A0B4J1H5 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Trbv20A0A0B4J1H5 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv20A0A0B4J1H5 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv20A0A0B4J1H5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv20A0A0B4J1H5 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv20A0A0B4J1H5 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv20A0A0B4J1H5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Trbv20A0A0B4J1H5 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv20A0A0B4J1H5 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Trbv20A0A0B4J1H5 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv20A0A0B4J1H5 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 80.3 ms