Protein–RNA interactions for Protein: A0A0A6YYE2

Trbv3, T cell receptor beta, variable 3 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv3A0A0A6YYE2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Trbv3A0A0A6YYE2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Trbv3A0A0A6YYE2 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC15.49■□□□□ 0.07
Trbv3A0A0A6YYE2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC15.48■□□□□ 0.07
Trbv3A0A0A6YYE2 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Trbv3A0A0A6YYE2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Trbv3A0A0A6YYE2 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Trbv3A0A0A6YYE2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.06
Trbv3A0A0A6YYE2 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Trbv3A0A0A6YYE2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Trbv3A0A0A6YYE2 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv3A0A0A6YYE2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv3A0A0A6YYE2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Trbv3A0A0A6YYE2 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms