Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.45■□□□□ 0.54
Trbc1A0A0A6YWV4 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbc1A0A0A6YWV4 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbc1A0A0A6YWV4 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
Trbc1A0A0A6YWV4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbc1A0A0A6YWV4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Trbc1A0A0A6YWV4 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Trbc1A0A0A6YWV4 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Trbc1A0A0A6YWV4 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.42■□□□□ 0.54
Trbc1A0A0A6YWV4 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbc1A0A0A6YWV4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Trbc1A0A0A6YWV4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbc1A0A0A6YWV4 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbc1A0A0A6YWV4 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbc1A0A0A6YWV4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbc1A0A0A6YWV4 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Trbc1A0A0A6YWV4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Trbc1A0A0A6YWV4 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Trbc1A0A0A6YWV4 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.39■□□□□ 0.54
Trbc1A0A0A6YWV4 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Trbc1A0A0A6YWV4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbc1A0A0A6YWV4 Gm21956-201ENSMUST00000179946 522 ntBASIC18.38■□□□□ 0.53
Trbc1A0A0A6YWV4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.38■□□□□ 0.53
Trbc1A0A0A6YWV4 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbc1A0A0A6YWV4 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Trbc1A0A0A6YWV4 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Trbc1A0A0A6YWV4 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Trbc1A0A0A6YWV4 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Trbc1A0A0A6YWV4 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Trbc1A0A0A6YWV4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbc1A0A0A6YWV4 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbc1A0A0A6YWV4 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbc1A0A0A6YWV4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Trbc1A0A0A6YWV4 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.36■□□□□ 0.53
Trbc1A0A0A6YWV4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Trbc1A0A0A6YWV4 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Trbc1A0A0A6YWV4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 335.6 ms