Protein–RNA interactions for Protein: A0A075B648

Trav12-3, T cell receptor alpha variable 12-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-3A0A075B648 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-3A0A075B648 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-3A0A075B648 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-3A0A075B648 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Trav12-3A0A075B648 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-3A0A075B648 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Trav12-3A0A075B648 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Trav12-3A0A075B648 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Grk6-206ENSMUST00000224995 2971 ntBASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Gm45606-201ENSMUST00000209836 2795 ntBASIC14.67□□□□□ -0.06
Trav12-3A0A075B648 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav12-3A0A075B648 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav12-3A0A075B648 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Gm8109-201ENSMUST00000194076 746 ntBASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 AC153911.1-201ENSMUST00000220378 758 ntBASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav12-3A0A075B648 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav12-3A0A075B648 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms