Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Trav4-2A0A075B638 Scarna2-201ENSMUST00000157560 414 ntBASIC15.94■□□□□ 0.14
Trav4-2A0A075B638 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC15.94■□□□□ 0.14
Trav4-2A0A075B638 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-2A0A075B638 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-2A0A075B638 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-2A0A075B638 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Trav4-2A0A075B638 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-2A0A075B638 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC15.93■□□□□ 0.14
Trav4-2A0A075B638 Gm16437-201ENSMUST00000025669 507 ntBASIC15.93■□□□□ 0.14
Trav4-2A0A075B638 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-2A0A075B638 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.93■□□□□ 0.14
Trav4-2A0A075B638 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-2A0A075B638 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.93■□□□□ 0.14
Trav4-2A0A075B638 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trav4-2A0A075B638 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trav4-2A0A075B638 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav4-2A0A075B638 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav4-2A0A075B638 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav4-2A0A075B638 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Gm11687-201ENSMUST00000118911 886 ntBASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Gm11847-201ENSMUST00000125165 1119 ntBASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav4-2A0A075B638 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav4-2A0A075B638 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav4-2A0A075B638 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 152.5 ms