Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Gm7143-201ENSMUST00000222811 859 ntBASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Trav13d-1A0A075B606 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-1A0A075B606 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-1A0A075B606 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-1A0A075B606 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-1A0A075B606 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-1A0A075B606 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-1A0A075B606 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-1A0A075B606 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Trav13d-1A0A075B606 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav13d-1A0A075B606 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav13d-1A0A075B606 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Gm10657-201ENSMUST00000193528 1031 ntBASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Gm42418-201ENSMUST00000182010 1831 ntBASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav13d-1A0A075B606 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav13d-1A0A075B606 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav13d-1A0A075B606 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 Gm43759-201ENSMUST00000196925 1261 ntBASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav13d-1A0A075B606 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms