Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Gm8285-201ENSMUST00000208293 759 ntBASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Gm7183-201ENSMUST00000213870 1005 ntBASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Gm18974-201ENSMUST00000221478 1031 ntBASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 CT573047.1-201ENSMUST00000223652 851 ntBASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 L3mbtl1-201ENSMUST00000035751 2724 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Plekhg4-206ENSMUST00000214056 3654 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Setd1b-201ENSMUST00000056053 7362 ntAPPRIS P2 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 5033428I22Rik-204ENSMUST00000210633 6652 ntTSL 5 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Prdm10-204ENSMUST00000215499 6772 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 Clock-201ENSMUST00000075159 7478 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Sec61a2Q9JLR1 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm44999-201ENSMUST00000207456 1493 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Vrtn-203ENSMUST00000167227 3440 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Plcxd2-201ENSMUST00000130481 7140 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Snord17-201ENSMUST00000104526 238 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm15131-201ENSMUST00000119124 595 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm16071-201ENSMUST00000119589 793 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm6485-201ENSMUST00000160676 439 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm17826-201ENSMUST00000189720 798 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm43058-201ENSMUST00000197645 625 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm44315-201ENSMUST00000203041 219 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm45398-201ENSMUST00000210561 165 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 AC153505.1-201ENSMUST00000218819 1071 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 CT025602.2-201ENSMUST00000226553 772 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Ddr1-201ENSMUST00000003628 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm10179-201ENSMUST00000086233 688 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Trpm2-203ENSMUST00000105401 7274 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Ank1-205ENSMUST00000117296 6794 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Sec61a2Q9JLR1 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Gm20796-201ENSMUST00000180355 5838 ntBASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Tom1l2-203ENSMUST00000093048 4864 ntTSL 5 BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Krt75-201ENSMUST00000042957 3266 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.9□□□□□ -0.82
Sec61a2Q9JLR1 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC9.9□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms