Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Atp6v1e2-201ENSMUST00000065758 1005 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Olfr533-201ENSMUST00000071755 1052 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm22982-201ENSMUST00000082613 319 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Tcp10a-202ENSMUST00000128533 2589 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Exoc3l4-201ENSMUST00000072646 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Apba2-206ENSMUST00000206246 3027 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Ppp6c-205ENSMUST00000204701 1495 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Gm42620-201ENSMUST00000197715 630 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Rpl15-ps3-201ENSMUST00000088480 615 ntBASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Cdh23Q99PF4 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Platr12-201ENSMUST00000141027 462 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm19705-204ENSMUST00000181524 413 ntTSL 2 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 AC105950.2-201ENSMUST00000220938 368 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm2721-202ENSMUST00000222652 459 ntTSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm10344-201ENSMUST00000193498 1419 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Sept9-204ENSMUST00000106349 2932 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Chrne-202ENSMUST00000102556 1591 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Defb48-201ENSMUST00000100493 445 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Dnmt3l-ps1-201ENSMUST00000118734 1253 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm12133-201ENSMUST00000121775 661 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gng2-203ENSMUST00000159073 960 ntAPPRIS P1 TSL 2 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm29200-201ENSMUST00000188118 1085 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Tead4-203ENSMUST00000130454 1718 ntTSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Jph2-202ENSMUST00000109425 4155 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Stard4-202ENSMUST00000118990 648 ntTSL 2 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm14983-201ENSMUST00000121551 323 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm11827-201ENSMUST00000142297 1257 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm43667-201ENSMUST00000198616 1095 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 1700029N11Rik-203ENSMUST00000220639 1092 ntTSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 AC154643.1-201ENSMUST00000225643 625 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Rpl14-ps1-201ENSMUST00000026901 653 ntBASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Fabp5-201ENSMUST00000029046 987 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Adh1-201ENSMUST00000004232 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 6030469F06Rik-202ENSMUST00000218473 1537 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
Cdh23Q99PF4 Gm38058-201ENSMUST00000194323 4368 ntBASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Gm13554-201ENSMUST00000137349 477 ntTSL 5 BASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Olfr754-ps1-201ENSMUST00000173181 911 ntBASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Gm29803-201ENSMUST00000205069 375 ntBASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Tmprss7-201ENSMUST00000114562 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Gfra2-203ENSMUST00000227697 1323 ntBASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Cdh23Q99PF4 Smpd4-219ENSMUST00000170366 2256 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms