Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm5159-201ENSMUST00000212733 1652 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 4930518I15Rik-201ENSMUST00000099141 1331 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm13192-201ENSMUST00000101199 208 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Ighv8-11-201ENSMUST00000103536 358 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm14398-201ENSMUST00000117287 1073 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm10443-201ENSMUST00000119024 210 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm12009-201ENSMUST00000121361 1100 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm25288-201ENSMUST00000122800 265 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Pradc1-204ENSMUST00000126805 953 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm43564-201ENSMUST00000196185 211 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm20568-201ENSMUST00000197129 208 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm43726-201ENSMUST00000199110 775 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm7880-201ENSMUST00000203748 871 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Prrg2-211ENSMUST00000211337 676 ntTSL 3 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 AC241616.1-201ENSMUST00000213741 166 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Olfr1121-201ENSMUST00000062555 945 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Git2-202ENSMUST00000086564 2984 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Corin-202ENSMUST00000167460 4639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Rbm6-201ENSMUST00000035201 3999 ntAPPRIS P3 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Asl-203ENSMUST00000160129 2413 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Nkx6-1Q99MA9 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm35363-201ENSMUST00000209330 1317 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm23439-201ENSMUST00000104292 132 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm23604-201ENSMUST00000104311 132 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm12606-202ENSMUST00000129527 1184 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm23582-201ENSMUST00000158530 139 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm4868-201ENSMUST00000164138 789 ntBASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Erg-208ENSMUST00000176345 1222 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC10.4□□□□□ -0.74
Nkx6-1Q99MA9 Gm17936-201ENSMUST00000199413 988 ntBASIC10.4□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms