Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Asgr1-202ENSMUST00000092959 1308 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Tipin-205ENSMUST00000216594 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Umod-206ENSMUST00000209095 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Klk1b26-201ENSMUST00000048945 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC13.57□□□□□ -0.24
RtcbQ99LF4 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Rgr-203ENSMUST00000225070 4704 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Nptn-202ENSMUST00000114121 863 ntTSL 5 BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Rps23-ps1-201ENSMUST00000116115 425 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 Gm14997-201ENSMUST00000119232 636 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 Gm14829-201ENSMUST00000121499 1138 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 Gm13505-201ENSMUST00000121666 817 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Rps23-ps2-201ENSMUST00000146939 432 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Gm40414-201ENSMUST00000197608 481 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 Gm44540-201ENSMUST00000205640 354 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 AC124356.1-201ENSMUST00000221469 698 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Pebp1-201ENSMUST00000036951 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Gm10254-201ENSMUST00000052888 867 ntBASIC13.56□□□□□ -0.24
RtcbQ99LF4 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RtcbQ99LF4 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RtcbQ99LF4 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Stx17-203ENSMUST00000107721 1771 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Rwdd3-204ENSMUST00000106466 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Matr3-216ENSMUST00000190653 1846 ntTSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Mettl8-201ENSMUST00000090849 1842 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm12916-201ENSMUST00000139012 948 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Pla2g1b-204ENSMUST00000145785 419 ntTSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Mipep-ps-201ENSMUST00000177439 291 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm17799-201ENSMUST00000183270 667 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Trav18-202ENSMUST00000186573 325 ntAPPRIS ALT2 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 BB187690-201ENSMUST00000198619 1176 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm44917-201ENSMUST00000208798 520 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm46349-201ENSMUST00000219678 917 ntTSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm12216-207ENSMUST00000220191 1073 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 AC132260.2-201ENSMUST00000224482 344 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Cdkn3-201ENSMUST00000067426 917 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gemin8-203ENSMUST00000096252 1039 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Taf1b-201ENSMUST00000075954 2209 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm29245-201ENSMUST00000187332 1416 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Gm29101-201ENSMUST00000188329 1471 ntBASIC13.55□□□□□ -0.24
RtcbQ99LF4 Strip2-205ENSMUST00000151738 5281 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RtcbQ99LF4 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC13.54□□□□□ -0.24
RtcbQ99LF4 1700082M22Rik-201ENSMUST00000067136 2022 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
RtcbQ99LF4 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms