Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.11□□□□□ -0.63
Smarcd2Q99JR8 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd2Q99JR8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Smarcd2Q99JR8 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Hsd3b1-202ENSMUST00000107016 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Tanc1-201ENSMUST00000037526 7873 ntAPPRIS P3 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Zfp14-201ENSMUST00000077787 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm23255-201ENSMUST00000102244 110 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gcg-201ENSMUST00000102733 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm11919-201ENSMUST00000117609 721 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm16209-201ENSMUST00000118457 627 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm12224-201ENSMUST00000124047 567 ntTSL 2 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm10171-201ENSMUST00000126220 628 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm14320-201ENSMUST00000137275 1023 ntTSL 3 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Eef1d-217ENSMUST00000151066 704 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm24078-201ENSMUST00000158184 103 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm6291-201ENSMUST00000179994 309 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm6677-201ENSMUST00000195100 441 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm38349-201ENSMUST00000195732 462 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm40414-201ENSMUST00000197608 481 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm45812-201ENSMUST00000212199 192 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 AC107752.1-201ENSMUST00000219362 469 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 CT025679.1-201ENSMUST00000227106 449 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gm10233-201ENSMUST00000089275 628 ntBASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Fcgr2b-204ENSMUST00000159969 1578 ntAPPRIS P4 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Cfap53-201ENSMUST00000114895 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
Smarcd2Q99JR8 Gfra2-203ENSMUST00000227697 1323 ntBASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Dlgap1-210ENSMUST00000146730 3936 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Agbl4-202ENSMUST00000097920 1798 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Etv1-205ENSMUST00000160856 1474 ntTSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Gm7964-201ENSMUST00000051522 1378 ntBASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Myo1h-207ENSMUST00000196676 1256 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 AC116797.2-202ENSMUST00000223587 1017 ntBASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Smarcd2Q99JR8 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 56.1 ms