Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Fcgbp-203ENSMUST00000138392 7926 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Fcgbp-201ENSMUST00000076648 7928 ntAPPRIS P2 TSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Fam184b-201ENSMUST00000016023 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Col19a1-202ENSMUST00000115244 4266 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm16070-201ENSMUST00000127328 5210 ntTSL 2 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Apoo-202ENSMUST00000113896 1032 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm42588-201ENSMUST00000200538 1297 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm3786-201ENSMUST00000202659 378 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 AC129975.1-201ENSMUST00000224816 592 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Abca2-201ENSMUST00000102919 8033 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gp2-201ENSMUST00000033255 1993 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 AC169511.2-201ENSMUST00000226674 2063 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm43321-201ENSMUST00000198897 2409 ntBASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Cyp26b1-202ENSMUST00000168003 4170 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Cyp26b1-201ENSMUST00000077705 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC10.35□□□□□ -0.75
Clrn1Q8K445 Shc1-210ENSMUST00000191485 3154 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm4780-202ENSMUST00000215200 2644 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Fubp1-209ENSMUST00000198227 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm6407-201ENSMUST00000176468 549 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm43380-201ENSMUST00000200421 220 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm30671-201ENSMUST00000214898 318 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm23680-201ENSMUST00000083162 164 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gsg1-203ENSMUST00000111910 1384 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.34□□□□□ -0.75
Clrn1Q8K445 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Clrn1Q8K445 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms