Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Gm42657-201ENSMUST00000201746 211 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm43947-201ENSMUST00000203019 959 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm45550-201ENSMUST00000209380 946 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Mnd1-201ENSMUST00000047368 875 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 E330021D16Rik-201ENSMUST00000058713 1116 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 4930432L08Rik-201ENSMUST00000132154 1608 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Lima1-201ENSMUST00000073691 4215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Tceanc-202ENSMUST00000112188 4050 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Trub1Q8C0D0 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Ifit1bl1-202ENSMUST00000168254 2215 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm24398-201ENSMUST00000157870 109 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm4982-201ENSMUST00000160440 1098 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Ly6c1-202ENSMUST00000179762 838 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm19013-201ENSMUST00000183895 1222 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm19014-201ENSMUST00000184828 1189 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm17877-201ENSMUST00000192578 814 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm37986-201ENSMUST00000193285 383 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm5865-201ENSMUST00000198713 637 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm42859-201ENSMUST00000199572 193 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm34868-201ENSMUST00000218341 530 ntTSL 3 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm23680-201ENSMUST00000083162 164 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Atg9a-205ENSMUST00000188347 4041 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Mei4-203ENSMUST00000189832 2578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Cpvl-202ENSMUST00000203101 1488 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm44999-201ENSMUST00000207456 1493 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Zfp280b-201ENSMUST00000061617 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Catsper1-201ENSMUST00000043380 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Eif4e1b-201ENSMUST00000110003 2131 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
Trub1Q8C0D0 Gm28624-201ENSMUST00000186430 2131 ntBASIC11.29□□□□□ -0.6
Trub1Q8C0D0 C2-206ENSMUST00000152417 2157 ntTSL 5 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm10110-202ENSMUST00000228705 3220 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Snw1-201ENSMUST00000021428 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Gm43375-201ENSMUST00000196705 2480 ntBASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Tnc-201ENSMUST00000030056 6833 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Trub1Q8C0D0 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms