Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gm24809-201ENSMUST00000175318 271 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm26119-201ENSMUST00000175601 104 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm26976-201ENSMUST00000182929 908 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm19587-201ENSMUST00000191395 545 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm37365-201ENSMUST00000193109 409 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm18035-201ENSMUST00000211962 589 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm9111-201ENSMUST00000219394 709 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Rps10-ps1-201ENSMUST00000074353 495 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm7536-201ENSMUST00000077389 444 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Gm5453-201ENSMUST00000080866 447 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Zfp286-202ENSMUST00000108705 1979 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Pcdh19Q80TF3 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Cblb-203ENSMUST00000226593 3864 ntAPPRIS ALT2 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm14539-201ENSMUST00000117527 174 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm14497-201ENSMUST00000119537 580 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm14165-201ENSMUST00000121456 952 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Nr6a1os-201ENSMUST00000129089 645 ntTSL 2 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Parvaos-201ENSMUST00000154848 1285 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm8723-201ENSMUST00000166076 820 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm8701-201ENSMUST00000169259 874 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm7929-201ENSMUST00000178711 624 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm3015-202ENSMUST00000179803 624 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm9723-201ENSMUST00000192100 457 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm38188-201ENSMUST00000192879 856 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm7525-201ENSMUST00000219425 454 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm7959-201ENSMUST00000221823 1078 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 AC130477.1-201ENSMUST00000226982 420 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Pcdh19Q80TF3 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Hk3-202ENSMUST00000123097 2896 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm37931-201ENSMUST00000194686 2866 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Tox4-201ENSMUST00000022766 5350 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gm37057-201ENSMUST00000192624 1916 ntBASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Ank1-206ENSMUST00000117662 6257 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Pcdh19Q80TF3 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 51.3 ms