Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Gm5845-201ENSMUST00000195812 796 ntBASIC8.39□□□□□ -1.07
NipblQ6KCD5 Pvrig-201ENSMUST00000211088 1080 ntAPPRIS P1 TSL 5 BASIC8.39□□□□□ -1.07
NipblQ6KCD5 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC8.39□□□□□ -1.07
NipblQ6KCD5 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC8.39□□□□□ -1.07
NipblQ6KCD5 CT009713.2-201ENSMUST00000225532 1149 ntBASIC8.39□□□□□ -1.07
NipblQ6KCD5 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
NipblQ6KCD5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm19027-201ENSMUST00000187291 1355 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Txndc5-204ENSMUST00000162075 2619 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Colca2-201ENSMUST00000114427 1263 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm8163-201ENSMUST00000122020 1060 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Ppp1r11-203ENSMUST00000174711 520 ntAPPRIS P1 TSL 3 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm6098-201ENSMUST00000180234 330 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm16619-201ENSMUST00000181817 1210 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm16470-201ENSMUST00000182456 998 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm27390-201ENSMUST00000184516 176 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm28809-201ENSMUST00000187542 782 ntTSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Rps27-202ENSMUST00000195998 458 ntTSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm42599-201ENSMUST00000201308 469 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm45484-201ENSMUST00000210310 1141 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm10015-201ENSMUST00000072570 465 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm42498-201ENSMUST00000199981 1372 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm42815-201ENSMUST00000198787 1470 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Dmtf1-201ENSMUST00000071921 3806 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm43972-201ENSMUST00000181398 1467 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Sh3bgrl3-202ENSMUST00000105879 518 ntTSL 3 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm15132-201ENSMUST00000118581 652 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm14153-201ENSMUST00000119923 1139 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm16329-201ENSMUST00000148174 371 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm24352-201ENSMUST00000158966 125 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Tex35-206ENSMUST00000187546 856 ntAPPRIS ALT2 TSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm7445-201ENSMUST00000192115 340 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Hcst-203ENSMUST00000208740 366 ntTSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 AC123698.1-201ENSMUST00000227090 402 ntBASIC8.38□□□□□ -1.07
NipblQ6KCD5 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Aqr-202ENSMUST00000102543 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC8.38□□□□□ -1.07
NipblQ6KCD5 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Lsg1-201ENSMUST00000117363 3180 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Spats2l-206ENSMUST00000167085 3929 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Trpc6-203ENSMUST00000217462 3168 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Dpep1-201ENSMUST00000019422 2236 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Slc12a8-203ENSMUST00000119173 2382 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Src-201ENSMUST00000029175 3906 ntAPPRIS P1 TSL 5 BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Scgb1b7-201ENSMUST00000108097 419 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Sgcg-202ENSMUST00000121148 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC8.37□□□□□ -1.07
NipblQ6KCD5 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Gm28671-201ENSMUST00000187036 692 ntBASIC8.37□□□□□ -1.07
NipblQ6KCD5 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 1600027J07Rik-201ENSMUST00000209501 489 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Gm45670-201ENSMUST00000211382 711 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Gm40723-201ENSMUST00000219407 603 ntTSL 3 BASIC8.37□□□□□ -1.07
NipblQ6KCD5 Gm3926-201ENSMUST00000223378 1123 ntBASIC8.37□□□□□ -1.07
NipblQ6KCD5 Ermard-209ENSMUST00000226561 1019 ntBASIC8.37□□□□□ -1.07
NipblQ6KCD5 Ms4a7-202ENSMUST00000056035 882 ntTSL 1 (best) BASIC8.37□□□□□ -1.07
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms