Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 AC159205.7-201ENSMUST00000225988 692 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Olfr1281-201ENSMUST00000090326 918 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Zeb2os-201ENSMUST00000127150 1305 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Gm10829-201ENSMUST00000202084 2988 ntBASIC14.09□□□□□ -0.15
Clcn1Q64347 Wwp2-204ENSMUST00000212205 2758 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 Arhgap30-201ENSMUST00000056449 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Clcn1Q64347 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Asb8-204ENSMUST00000143400 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Clcn1Q64347 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Clcn1Q64347 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clcn1Q64347 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clcn1Q64347 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Clcn1Q64347 Gm14005-209ENSMUST00000224993 1832 ntBASIC14.08□□□□□ -0.15
Clcn1Q64347 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Clcn1Q64347 Gm43172-201ENSMUST00000202139 2137 ntBASIC14.08□□□□□ -0.16
Clcn1Q64347 Adamts13-201ENSMUST00000014996 3474 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Eef1akmt4-202ENSMUST00000119224 1464 ntTSL 2 BASIC14.08□□□□□ -0.16
Clcn1Q64347 Gm13505-201ENSMUST00000121666 817 ntBASIC14.08□□□□□ -0.16
Clcn1Q64347 Mrpl24-204ENSMUST00000121920 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Gm16217-201ENSMUST00000124182 616 ntTSL 3 BASIC14.08□□□□□ -0.16
Clcn1Q64347 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Mir6387-201ENSMUST00000184042 108 ntBASIC14.08□□□□□ -0.16
Clcn1Q64347 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Gm37533-201ENSMUST00000193848 545 ntBASIC14.08□□□□□ -0.16
Clcn1Q64347 Gm43752-201ENSMUST00000198475 697 ntBASIC14.08□□□□□ -0.16
Clcn1Q64347 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Clcn1Q64347 Atp5j2-201ENSMUST00000037056 540 ntTSL 5 BASIC14.08□□□□□ -0.16
Clcn1Q64347 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Rhox8-201ENSMUST00000071885 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
Clcn1Q64347 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC14.08□□□□□ -0.16
Clcn1Q64347 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Slc40a1-201ENSMUST00000027137 3370 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Srr-201ENSMUST00000065211 3699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Clcn1Q64347 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Impdh2-ps-201ENSMUST00000120826 1545 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm11475-201ENSMUST00000118482 476 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm5909-201ENSMUST00000119768 1281 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm27956-201ENSMUST00000175604 260 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 Mir8091-201ENSMUST00000183602 139 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm6606-201ENSMUST00000193613 947 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm43084-201ENSMUST00000200696 947 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 1700086D15Rik-201ENSMUST00000020855 1092 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Prl7a1-203ENSMUST00000224852 1283 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm43760-201ENSMUST00000202120 3015 ntBASIC14.07□□□□□ -0.16
Clcn1Q64347 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Mmel1-202ENSMUST00000080559 2926 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Clcn1Q64347 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Clcn1Q64347 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Clcn1Q64347 Zc3h6-202ENSMUST00000110320 4916 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Clcn1Q64347 Crispld2-202ENSMUST00000108972 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 85.4 ms