Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm23218-201ENSMUST00000158124 276 ntBASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm22877-201ENSMUST00000175451 105 ntBASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm18014-201ENSMUST00000183369 817 ntBASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm11634-202ENSMUST00000209862 573 ntAPPRIS P5 TSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm31513-201ENSMUST00000223261 684 ntTSL 2 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm7536-201ENSMUST00000077389 444 ntBASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Mtch2-202ENSMUST00000111467 2281 ntTSL 5 BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Gm26672-201ENSMUST00000180922 2685 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Vps54Q5SPW0 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Ankrd7-202ENSMUST00000115396 1157 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Gm14213-201ENSMUST00000119778 768 ntBASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Myl3-202ENSMUST00000124267 575 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 BB557941-201ENSMUST00000126549 1097 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Nmbr-207ENSMUST00000190751 921 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Gm5298-201ENSMUST00000201122 892 ntBASIC13.13□□□□□ -0.31
Vps54Q5SPW0 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 CT025551.1-201ENSMUST00000223996 692 ntBASIC13.13□□□□□ -0.31
Vps54Q5SPW0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC13.13□□□□□ -0.31
Vps54Q5SPW0 CT025679.1-201ENSMUST00000227106 449 ntBASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Gm45675-201ENSMUST00000211202 3429 ntBASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Cklf-202ENSMUST00000098464 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Gm14820-201ENSMUST00000126286 1449 ntTSL 3 BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Vps54Q5SPW0 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Gm13583-202ENSMUST00000151931 1476 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Nr4a2-201ENSMUST00000028166 3568 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Gm5244-201ENSMUST00000164001 339 ntBASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Tspo2-201ENSMUST00000024794 956 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Wdr46-ps-201ENSMUST00000200591 1712 ntBASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Gm37058-201ENSMUST00000193393 1644 ntBASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Vps54Q5SPW0 Nr1h4-203ENSMUST00000105297 2013 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 80.4 ms