Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.47□□□□□ -0.89
Znf48Q3US17 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
Znf48Q3US17 Usp3-211ENSMUST00000174387 1901 ntTSL 5 BASIC9.46□□□□□ -0.89
Znf48Q3US17 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.46□□□□□ -0.89
Znf48Q3US17 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Znf48Q3US17 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
Znf48Q3US17 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Znf48Q3US17 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Znf48Q3US17 H2-T10-202ENSMUST00000174382 1699 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Znf48Q3US17 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Znf48Q3US17 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Znf48Q3US17 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
Znf48Q3US17 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Znf48Q3US17 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Znf48Q3US17 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm6542-201ENSMUST00000153606 772 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm22144-201ENSMUST00000157402 102 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm22138-201ENSMUST00000158748 128 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Hsd11b1-203ENSMUST00000160929 1256 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Vmn1r-ps62-201ENSMUST00000173275 910 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 V1rg10-201ENSMUST00000183378 937 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Mir7076-201ENSMUST00000183519 74 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm27530-201ENSMUST00000184096 98 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 4930565D16Rik-201ENSMUST00000192777 1112 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm43774-201ENSMUST00000196327 878 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm35960-201ENSMUST00000202712 767 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm17831-201ENSMUST00000205579 900 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm44849-201ENSMUST00000207595 484 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Timm10b-210ENSMUST00000209588 373 ntTSL 3 BASIC9.46□□□□□ -0.9
Znf48Q3US17 8030455M16Rik-201ENSMUST00000213014 902 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 AC154184.3-201ENSMUST00000225620 1090 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 AC154484.1-201ENSMUST00000227311 771 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 AC147628.1-201ENSMUST00000228193 688 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Srp19-201ENSMUST00000072576 876 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Olfr884-201ENSMUST00000077732 930 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm9387-201ENSMUST00000098624 1320 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Olfr183-202ENSMUST00000206303 1862 ntAPPRIS P1 TSL 3 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Mir124-2hg-204ENSMUST00000188983 1365 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm42968-201ENSMUST00000198578 1372 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm19210-201ENSMUST00000199562 1350 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Olfr183-204ENSMUST00000214831 1906 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm5136-201ENSMUST00000218023 1397 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Tie1-203ENSMUST00000184261 4234 ntTSL 2 BASIC9.46□□□□□ -0.9
Znf48Q3US17 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Ngef-202ENSMUST00000068681 3109 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Chrm1-202ENSMUST00000163785 6271 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Znf48Q3US17 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC9.46□□□□□ -0.9
Znf48Q3US17 Gm42141-201ENSMUST00000196534 2172 ntBASIC9.46□□□□□ -0.9
Znf48Q3US17 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Znf48Q3US17 Steap3-204ENSMUST00000112643 2873 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Muc13-201ENSMUST00000023520 2942 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm44929-202ENSMUST00000209134 1653 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Alg13-202ENSMUST00000070801 1802 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Thsd4-206ENSMUST00000171654 8522 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Psd2-203ENSMUST00000175734 4300 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Osgin1-201ENSMUST00000098365 1959 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Znf48Q3US17 Bri3-202ENSMUST00000110695 669 ntTSL 2 BASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm12792-201ENSMUST00000117669 1019 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm12816-201ENSMUST00000118069 1212 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm11451-201ENSMUST00000118946 630 ntBASIC9.45□□□□□ -0.9
Znf48Q3US17 Gm14585-201ENSMUST00000120713 634 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms