Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Gm24466-201ENSMUST00000179978 109 ntBASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 D130017N08Rik-201ENSMUST00000180460 510 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 C430039J16Rik-201ENSMUST00000181148 658 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 2700099C18Rik-203ENSMUST00000182475 969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Gm28499-201ENSMUST00000191576 666 ntTSL 2 BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Stpg4-201ENSMUST00000040609 847 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Gm44241-201ENSMUST00000203230 1662 ntBASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Oprm1-213ENSMUST00000105604 1616 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Cd14-201ENSMUST00000061829 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Sf3b2Q3UJB0 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Klf10-203ENSMUST00000227920 2144 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Eif4g1-217ENSMUST00000143939 5114 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Fut1-201ENSMUST00000008605 2580 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm24066-201ENSMUST00000104515 131 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm15132-201ENSMUST00000118581 652 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm13372-201ENSMUST00000123129 688 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Aamdc-209ENSMUST00000144858 380 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm16280-201ENSMUST00000162458 623 ntTSL 3 BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Platr17-201ENSMUST00000172817 807 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm27390-201ENSMUST00000184516 176 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm36980-201ENSMUST00000195643 622 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Fxyd7-202ENSMUST00000206341 620 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm31374-201ENSMUST00000213885 619 ntTSL 5 BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm8170-201ENSMUST00000218581 945 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 AC165092.1-201ENSMUST00000224018 486 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 AC165260.2-201ENSMUST00000225371 395 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Fxyd7-201ENSMUST00000073892 693 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Gm45110-201ENSMUST00000205704 1402 ntBASIC14.21□□□□□ -0.13
Sf3b2Q3UJB0 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3b2Q3UJB0 Pfn4-202ENSMUST00000178879 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3b2Q3UJB0 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Sf3b2Q3UJB0 Gm38246-201ENSMUST00000194318 1511 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Mrpl24-202ENSMUST00000119968 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Tcf4-250ENSMUST00000202458 2610 ntTSL 5 BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Prkch-201ENSMUST00000021527 3545 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm15720-201ENSMUST00000117133 282 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm28180-201ENSMUST00000189608 722 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Eif3k-204ENSMUST00000208616 909 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Tmem238l-203ENSMUST00000211300 930 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm3791-201ENSMUST00000220790 768 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 3110083C13Rik-202ENSMUST00000224786 907 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 AC134860.2-201ENSMUST00000225277 1036 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 AC139155.1-201ENSMUST00000226043 444 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 AC154806.7-201ENSMUST00000227998 202 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Atf7-201ENSMUST00000096143 390 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm8684-201ENSMUST00000195078 1564 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Cog7-203ENSMUST00000205438 3355 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Gm45011-201ENSMUST00000207620 2297 ntBASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Sf3b2Q3UJB0 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms