Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Rbfox2-208ENSMUST00000227930 1218 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm18981-201ENSMUST00000185373 1599 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Styxl1-201ENSMUST00000053906 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Dsc3-201ENSMUST00000115848 5333 ntAPPRIS ALT2 TSL 2 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Slc7a9-202ENSMUST00000118383 1869 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Dhx30-215ENSMUST00000198425 3968 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Prpf31-201ENSMUST00000008517 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Pard3b-201ENSMUST00000046673 3426 ntTSL 5 BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Tex11-202ENSMUST00000113716 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Ido1-202ENSMUST00000110667 1656 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Nadsyn1-201ENSMUST00000033415 2641 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Gm12592-201ENSMUST00000155332 2954 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 Hgd-203ENSMUST00000160847 1702 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Trim63Q38HM4 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC8.97□□□□□ -0.97
Trim63Q38HM4 Deptor-202ENSMUST00000096433 8547 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Gm37348-201ENSMUST00000193104 1789 ntBASIC8.96□□□□□ -0.97
Trim63Q38HM4 Aqp4-201ENSMUST00000079081 5082 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Meis2-203ENSMUST00000102538 2810 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Tuba4a-202ENSMUST00000186213 2840 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Meis2-201ENSMUST00000028639 2831 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Map2-206ENSMUST00000114017 4981 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Hk1-201ENSMUST00000072357 3639 ntAPPRIS P4 TSL 5 BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Rnf38-201ENSMUST00000045793 5012 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Parp3-201ENSMUST00000067218 2962 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Sox6-201ENSMUST00000072804 8227 ntAPPRIS P4 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Cdh3-201ENSMUST00000080797 4384 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
Trim63Q38HM4 Morf4l2-201ENSMUST00000033797 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm24934-201ENSMUST00000103764 111 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 Mrpl55-205ENSMUST00000108787 718 ntTSL 2 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Pla2g1b-202ENSMUST00000112071 361 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm12314-201ENSMUST00000118104 538 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm16479-201ENSMUST00000121706 932 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Snhg17-206ENSMUST00000152125 1046 ntTSL 3 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm17837-201ENSMUST00000186435 985 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm44397-201ENSMUST00000195950 113 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm6888-201ENSMUST00000221983 706 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Homer1-204ENSMUST00000102752 5713 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Rpp14-201ENSMUST00000023924 2401 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Inpp4a-207ENSMUST00000136846 3576 ntAPPRIS ALT1 TSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Olfr1090-203ENSMUST00000217043 2054 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Ccdc183-201ENSMUST00000028309 1719 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Rimbp2-202ENSMUST00000196085 3732 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 AC109214.1-201ENSMUST00000219520 1372 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gm3372-201ENSMUST00000198806 1792 ntBASIC8.96□□□□□ -0.98
Trim63Q38HM4 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Slc1a7-201ENSMUST00000106713 3007 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Gfap-202ENSMUST00000077902 2600 ntTSL 1 (best) BASIC8.96□□□□□ -0.98
Trim63Q38HM4 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Ctnnd1-210ENSMUST00000111684 6021 ntTSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Ndst3-207ENSMUST00000172537 3152 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.98
Trim63Q38HM4 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gm498-202ENSMUST00000152910 1507 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Lgals9-203ENSMUST00000108269 1586 ntAPPRIS P3 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 9430098F02Rik-201ENSMUST00000180832 2986 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Ccpg1-202ENSMUST00000085350 2969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Ftsj3-201ENSMUST00000021048 3144 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC8.95□□□□□ -0.98
Trim63Q38HM4 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC8.95□□□□□ -0.98
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms