Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Ciart-201ENSMUST00000036418 1398 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Vwf-201ENSMUST00000100941 1807 ntTSL 5 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm15423-201ENSMUST00000150600 1430 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm6341-201ENSMUST00000119683 411 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm26070-201ENSMUST00000157500 137 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Mipep-ps-201ENSMUST00000177439 291 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Rps10-208ENSMUST00000178774 498 ntAPPRIS P1 TSL 2 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Gm44978-201ENSMUST00000206635 317 ntBASIC5.57□□□□□ -1.52
Ush2AQ2QI47 AC153500.1-201ENSMUST00000219794 625 ntTSL 3 BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Oosp1-201ENSMUST00000048214 972 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
Ush2AQ2QI47 Ttc30a2-201ENSMUST00000099995 2431 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Tmem92-201ENSMUST00000100554 2043 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Serpina10-202ENSMUST00000121625 1424 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Rhox10-201ENSMUST00000115150 763 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm8065-201ENSMUST00000164048 605 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm18513-201ENSMUST00000177313 560 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Iglc1-201ENSMUST00000200568 454 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm43928-201ENSMUST00000203737 409 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 AC132384.10-201ENSMUST00000217862 1204 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm10036-201ENSMUST00000079733 537 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Casp14-201ENSMUST00000005488 2336 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm28800-201ENSMUST00000186230 2243 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm7831-201ENSMUST00000117990 552 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm9392-201ENSMUST00000119337 554 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm34664-202ENSMUST00000207661 1032 ntTSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm16252-202ENSMUST00000215604 1232 ntTSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Olfr132-201ENSMUST00000087128 942 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm7224-201ENSMUST00000121359 2066 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Osgin1-206ENSMUST00000152420 2005 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 E130215H24Rik-201ENSMUST00000145525 939 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm16238-201ENSMUST00000159343 586 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm2541-201ENSMUST00000161209 711 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm26612-201ENSMUST00000180785 1055 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm30173-201ENSMUST00000195035 1128 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Fcer2a-207ENSMUST00000208492 1053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm29794-201ENSMUST00000218919 1247 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 AC132239.1-201ENSMUST00000223157 773 ntTSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Xlr4a-201ENSMUST00000078775 1162 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Slc4a9-202ENSMUST00000115694 2861 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Btrc-209ENSMUST00000224478 2194 ntBASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Ush2AQ2QI47 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms