Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 CT030159.3-201ENSMUST00000222936 1481 ntTSL 5 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC13.79□□□□□ -0.2
Smarcc1P97496 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
Smarcc1P97496 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Smarcc1P97496 Gm4755-201ENSMUST00000181803 2647 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Kcnab2-201ENSMUST00000030768 3533 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Smarcc1P97496 Sin3a-206ENSMUST00000168177 5086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Arhgap4-203ENSMUST00000114405 6299 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Adck2-204ENSMUST00000140364 3542 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm15636-201ENSMUST00000119205 668 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm6238-201ENSMUST00000120999 465 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm11736-201ENSMUST00000121468 505 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Ndufb5-202ENSMUST00000121778 574 ntTSL 3 BASIC13.78□□□□□ -0.2
Smarcc1P97496 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm13857-201ENSMUST00000139645 173 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm7805-201ENSMUST00000154348 448 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Arl14-201ENSMUST00000183126 1200 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm29543-201ENSMUST00000188138 967 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm36982-201ENSMUST00000193796 1128 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Ccdc114-205ENSMUST00000211367 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm9619-201ENSMUST00000211587 762 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 AC102523.1-201ENSMUST00000228706 1144 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Rps9-201ENSMUST00000006496 751 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Smarcc1P97496 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smarcc1P97496 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.78□□□□□ -0.2
Smarcc1P97496 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Lcmt2-202ENSMUST00000110674 3056 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Smarcc1P97496 Arhgap1-202ENSMUST00000111329 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Ercc4-201ENSMUST00000023206 3480 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Gm44806-201ENSMUST00000205574 2303 ntBASIC13.78□□□□□ -0.2
Smarcc1P97496 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Tspan14-201ENSMUST00000047652 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Smarcc1P97496 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcc1P97496 Lgr5-201ENSMUST00000020350 4714 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcc1P97496 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcc1P97496 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcc1P97496 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Smarcc1P97496 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Itpa-ps1-201ENSMUST00000117207 597 ntBASIC13.77□□□□□ -0.21
Smarcc1P97496 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Gm14004-201ENSMUST00000138875 590 ntTSL 2 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Gm28415-201ENSMUST00000187528 452 ntTSL 2 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Gm42732-201ENSMUST00000202887 1197 ntBASIC13.77□□□□□ -0.21
Smarcc1P97496 Gm44753-202ENSMUST00000208297 562 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
Smarcc1P97496 E230034D01Rik-203ENSMUST00000217357 1159 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 AC155300.1-201ENSMUST00000219134 480 ntBASIC13.77□□□□□ -0.21
Smarcc1P97496 Gm32872-201ENSMUST00000220037 205 ntTSL 3 BASIC13.77□□□□□ -0.21
Smarcc1P97496 AC154461.1-201ENSMUST00000224207 1005 ntBASIC13.77□□□□□ -0.21
Smarcc1P97496 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Prg2-201ENSMUST00000028467 838 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Hspb11-201ENSMUST00000046558 608 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Mrgpra1-201ENSMUST00000098438 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Smarcc1P97496 Rasgrp4-214ENSMUST00000205027 2717 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC13.77□□□□□ -0.21
Smarcc1P97496 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Trpv6-203ENSMUST00000201471 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Smarcc1P97496 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
Smarcc1P97496 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms