Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Gramd2-201ENSMUST00000098661 1368 ntAPPRIS P2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Svs1-201ENSMUST00000037696 2775 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Npas1P97459 Gm44067-201ENSMUST00000203350 2971 ntTSL 5 BASIC9.19□□□□□ -0.94
Npas1P97459 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Npas1P97459 Capn3-202ENSMUST00000028749 3174 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC9.19□□□□□ -0.94
Npas1P97459 AC131081.1-201ENSMUST00000219535 1736 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Bloc1s6-201ENSMUST00000005954 3484 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC9.19□□□□□ -0.94
Npas1P97459 Gm45797-201ENSMUST00000212759 1921 ntBASIC9.19□□□□□ -0.94
Npas1P97459 Oc90-201ENSMUST00000060522 1909 ntAPPRIS P3 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Ly9-203ENSMUST00000111277 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.19□□□□□ -0.94
Npas1P97459 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.19□□□□□ -0.94
Npas1P97459 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.19□□□□□ -0.94
Npas1P97459 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC9.19□□□□□ -0.94
Npas1P97459 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Cep112-201ENSMUST00000061287 3485 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Gm15903-202ENSMUST00000199631 3518 ntBASIC9.18□□□□□ -0.94
Npas1P97459 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Atxn1l-201ENSMUST00000093162 7526 ntAPPRIS P1 TSL 2 BASIC9.18□□□□□ -0.94
Npas1P97459 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Pld1-201ENSMUST00000067757 4804 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Mid1-204ENSMUST00000112104 3860 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Gm11222-201ENSMUST00000119005 738 ntBASIC9.18□□□□□ -0.94
Npas1P97459 Gm14726-201ENSMUST00000120623 896 ntBASIC9.18□□□□□ -0.94
Npas1P97459 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC9.18□□□□□ -0.94
Npas1P97459 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 D030018L15Rik-202ENSMUST00000139808 1859 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Sfi1-210ENSMUST00000140846 3604 ntAPPRIS ALT2 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 F730016J06Rik-203ENSMUST00000156508 2593 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Gm27530-201ENSMUST00000184096 98 ntBASIC9.18□□□□□ -0.94
Npas1P97459 Gm27516-201ENSMUST00000184237 98 ntBASIC9.18□□□□□ -0.94
Npas1P97459 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC9.18□□□□□ -0.94
Npas1P97459 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC9.18□□□□□ -0.94
Npas1P97459 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.18□□□□□ -0.94
Npas1P97459 Gm32111-201ENSMUST00000207689 846 ntBASIC9.18□□□□□ -0.94
Npas1P97459 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC9.18□□□□□ -0.94
Npas1P97459 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC9.18□□□□□ -0.94
Npas1P97459 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.18□□□□□ -0.94
Npas1P97459 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Slc28a1-201ENSMUST00000026820 2846 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Uox-201ENSMUST00000029837 2737 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC9.18□□□□□ -0.94
Npas1P97459 Acer2-202ENSMUST00000084433 4060 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Stat6-201ENSMUST00000092074 3775 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Pla2g4e-201ENSMUST00000090071 4477 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Gmip-201ENSMUST00000036074 3933 ntAPPRIS P2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Tnfaip1-201ENSMUST00000017759 3720 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.18□□□□□ -0.94
Npas1P97459 Irf9-203ENSMUST00000134863 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Qars-201ENSMUST00000006838 2800 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Ssrp1-209ENSMUST00000168266 2721 ntAPPRIS P1 TSL 1 (best) BASIC9.18□□□□□ -0.94
Npas1P97459 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Olfr126-203ENSMUST00000217487 1859 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Npas1P97459 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.17□□□□□ -0.94
Npas1P97459 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Smchd1-201ENSMUST00000127430 7052 ntAPPRIS P1 TSL 5 BASIC9.17□□□□□ -0.94
Npas1P97459 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Dram2-202ENSMUST00000067630 3271 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Wdr31-201ENSMUST00000030087 1440 ntAPPRIS P3 TSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC9.17□□□□□ -0.94
Npas1P97459 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC9.17□□□□□ -0.94
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms