Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Abi2-205ENSMUST00000187709 1671 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lig3P97386 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lig3P97386 Cisd3-203ENSMUST00000107585 586 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC12.08□□□□□ -0.48
Lig3P97386 Gm15615-201ENSMUST00000118876 198 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC12.08□□□□□ -0.48
Lig3P97386 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC12.08□□□□□ -0.48
Lig3P97386 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC12.08□□□□□ -0.48
Lig3P97386 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lig3P97386 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lig3P97386 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Mir6941-201ENSMUST00000184711 59 ntBASIC12.08□□□□□ -0.48
Lig3P97386 1700065I16Rik-201ENSMUST00000185277 512 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Gm5700-201ENSMUST00000191483 989 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC12.08□□□□□ -0.48
Lig3P97386 Gm8436-201ENSMUST00000210152 1080 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Gm5749-201ENSMUST00000210673 1090 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Gm45527-201ENSMUST00000211052 774 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Lig3P97386 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Gcnt7-201ENSMUST00000099060 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.08□□□□□ -0.48
Lig3P97386 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Kcnab2-207ENSMUST00000160884 3922 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lig3P97386 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lig3P97386 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Lig3P97386 Gm5703-201ENSMUST00000186658 3973 ntBASIC12.08□□□□□ -0.48
Lig3P97386 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Lig3P97386 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Scnn1b-201ENSMUST00000033161 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Lig3P97386 Gm43807-201ENSMUST00000200678 1781 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Papln-201ENSMUST00000021646 4260 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
Lig3P97386 2410004P03Rik-201ENSMUST00000095823 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Gm14213-201ENSMUST00000119778 768 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Gm15610-201ENSMUST00000120584 195 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC12.07□□□□□ -0.48
Lig3P97386 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Gm20414-201ENSMUST00000172918 646 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Gm28833-201ENSMUST00000189671 559 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Gm42511-201ENSMUST00000196160 234 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Gm42433-201ENSMUST00000196806 940 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Gm7082-201ENSMUST00000209880 969 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC12.07□□□□□ -0.48
Lig3P97386 Ftl1-204ENSMUST00000210864 503 ntTSL 5 BASIC12.07□□□□□ -0.48
Lig3P97386 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC12.07□□□□□ -0.48
Lig3P97386 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.07□□□□□ -0.48
Lig3P97386 AC122346.3-201ENSMUST00000223983 306 ntBASIC12.07□□□□□ -0.48
Lig3P97386 AC129931.1-201ENSMUST00000228865 1861 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Gm23105-201ENSMUST00000083719 134 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lig3P97386 Gm21136-201ENSMUST00000186812 2575 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Gm6605-201ENSMUST00000031488 2574 ntBASIC12.07□□□□□ -0.48
Lig3P97386 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lig3P97386 Ldb3-204ENSMUST00000064098 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Gm1110-201ENSMUST00000115261 1996 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Lig3P97386 Aco2-201ENSMUST00000023116 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Lig3P97386 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Lig3P97386 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lig3P97386 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC12.06□□□□□ -0.48
Lig3P97386 Gm6170-201ENSMUST00000187672 1388 ntBASIC12.06□□□□□ -0.48
Lig3P97386 Adat1-201ENSMUST00000034427 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Agpat3-204ENSMUST00000105389 3678 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Lig3P97386 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Lig3P97386 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Lig3P97386 Gm11619-201ENSMUST00000117474 237 ntBASIC12.06□□□□□ -0.48
Lig3P97386 Gm11783-201ENSMUST00000119549 885 ntBASIC12.06□□□□□ -0.48
Lig3P97386 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC12.06□□□□□ -0.48
Lig3P97386 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms