Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Ddx56-201ENSMUST00000004507 1956 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.9□□□□□ -0.5
CiitaP79621 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
CiitaP79621 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
CiitaP79621 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
CiitaP79621 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CiitaP79621 Maip1-201ENSMUST00000027114 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CiitaP79621 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CiitaP79621 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CiitaP79621 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
CiitaP79621 Gm29358-202ENSMUST00000187941 3227 ntBASIC11.9□□□□□ -0.51
CiitaP79621 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
CiitaP79621 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
CiitaP79621 Tex45-201ENSMUST00000047265 1613 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 Zw10-201ENSMUST00000034803 2863 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Creb3l4-201ENSMUST00000029547 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm22937-201ENSMUST00000103954 131 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Bglap3-203ENSMUST00000107543 1047 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm15524-201ENSMUST00000159874 463 ntTSL 3 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm16587-201ENSMUST00000161943 863 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Gm17070-201ENSMUST00000170463 784 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm18733-202ENSMUST00000174447 401 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm18201-201ENSMUST00000174735 875 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm23647-201ENSMUST00000175042 109 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Rn5s-201ENSMUST00000177555 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s108-201ENSMUST00000177575 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s121-201ENSMUST00000177589 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s146-201ENSMUST00000177889 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm22109-201ENSMUST00000177995 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm22291-201ENSMUST00000178027 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s141-201ENSMUST00000178066 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm23284-201ENSMUST00000178069 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s100-201ENSMUST00000178106 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s111-201ENSMUST00000178203 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s105-201ENSMUST00000178499 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s149-201ENSMUST00000178520 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s103-201ENSMUST00000178755 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s123-201ENSMUST00000178804 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s142-201ENSMUST00000178820 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s144-201ENSMUST00000178859 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s139-201ENSMUST00000178975 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s134-201ENSMUST00000178983 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s136-201ENSMUST00000179080 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm25018-201ENSMUST00000179081 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s104-201ENSMUST00000179107 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s113-201ENSMUST00000179143 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s133-201ENSMUST00000179275 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s117-201ENSMUST00000179431 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm25212-201ENSMUST00000179432 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s138-201ENSMUST00000179476 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s122-201ENSMUST00000179500 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s143-201ENSMUST00000179542 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s107-201ENSMUST00000179704 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm26391-201ENSMUST00000179843 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s110-201ENSMUST00000179995 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s128-201ENSMUST00000180096 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 n-R5s124-201ENSMUST00000180334 119 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Anapc16-203ENSMUST00000182152 847 ntTSL 2 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm5700-201ENSMUST00000191483 989 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm7047-201ENSMUST00000196224 1063 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm6352-201ENSMUST00000203583 1134 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm44647-201ENSMUST00000207402 428 ntBASIC11.89□□□□□ -0.51
CiitaP79621 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Gm18706-201ENSMUST00000210053 1066 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm39397-201ENSMUST00000212331 228 ntTSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 Gm8170-201ENSMUST00000218581 945 ntBASIC11.89□□□□□ -0.51
CiitaP79621 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Tspan8-202ENSMUST00000080630 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Gm24089-201ENSMUST00000093696 109 ntBASIC11.89□□□□□ -0.51
CiitaP79621 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
CiitaP79621 Aplp2-209ENSMUST00000217641 3462 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CiitaP79621 Gm37058-201ENSMUST00000193393 1644 ntBASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms