Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Mup-ps26-201ENSMUST00000121751 202 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm13091-201ENSMUST00000128800 469 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gng13-202ENSMUST00000172002 719 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm25732-201ENSMUST00000175168 60 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC12.15□□□□□ -0.46
Hmgb1P63158 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Myl4-201ENSMUST00000018800 879 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm44315-201ENSMUST00000203041 219 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Folr2-203ENSMUST00000210598 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm5363-201ENSMUST00000211927 938 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
Hmgb1P63158 C4b-201ENSMUST00000069507 5379 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Gm5822-201ENSMUST00000161562 1378 ntBASIC12.15□□□□□ -0.46
Hmgb1P63158 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Hmgb1P63158 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Hmgb1P63158 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgb1P63158 Gm44369-201ENSMUST00000204543 2175 ntBASIC12.15□□□□□ -0.47
Hmgb1P63158 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC12.15□□□□□ -0.47
Hmgb1P63158 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgb1P63158 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgb1P63158 4933415A04Rik-201ENSMUST00000056256 2009 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Hmgb1P63158 Colq-201ENSMUST00000112027 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Hmgb1P63158 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Bicd2-202ENSMUST00000110084 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm37367-201ENSMUST00000191771 2602 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm23272-201ENSMUST00000104053 129 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Zfp629-204ENSMUST00000128731 823 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmgb1P63158 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm21092-201ENSMUST00000178995 955 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm28375-201ENSMUST00000185304 430 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Mir7686-201ENSMUST00000200604 57 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm5178-201ENSMUST00000219380 898 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 AC131330.1-201ENSMUST00000227814 1015 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Gm23105-201ENSMUST00000083719 134 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Eef1d-203ENSMUST00000089680 973 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Lrrc8b-201ENSMUST00000112707 6726 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Sec16a-201ENSMUST00000091252 8737 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Vmn2r18-201ENSMUST00000165928 2367 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 AC158777.1-201ENSMUST00000226216 1724 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 AC113441.2-201ENSMUST00000221538 1468 ntBASIC12.14□□□□□ -0.47
Hmgb1P63158 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Hmgb1P63158 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC12.14□□□□□ -0.47
Hmgb1P63158 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Hmgb1P63158 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Hmgb1P63158 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms