Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC11.28□□□□□ -0.6
Ybx1P62960 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC11.28□□□□□ -0.6
Ybx1P62960 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC11.28□□□□□ -0.6
Ybx1P62960 Gm17190-202ENSMUST00000185178 1074 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Ybx1P62960 Gm7238-201ENSMUST00000206467 973 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Calca-207ENSMUST00000206853 720 ntTSL 2 BASIC11.28□□□□□ -0.6
Ybx1P62960 AC154407.1-201ENSMUST00000226777 526 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC11.28□□□□□ -0.6
Ybx1P62960 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.28□□□□□ -0.6
Ybx1P62960 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.28□□□□□ -0.6
Ybx1P62960 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC11.28□□□□□ -0.6
Ybx1P62960 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Ybx1P62960 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Etfbkmt-209ENSMUST00000179873 1576 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Ybx1P62960 Rims1-206ENSMUST00000115273 6107 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Ybx1P62960 Plcd4-204ENSMUST00000113747 2720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Ybx1P62960 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Ybx1P62960 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ybx1P62960 Capn15-201ENSMUST00000041641 3520 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Ybx1P62960 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ybx1P62960 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ybx1P62960 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Ybx1P62960 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Ybx1P62960 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Ybx1P62960 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC11.27□□□□□ -0.61
Ybx1P62960 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Mir181d-201ENSMUST00000102383 72 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Gm23769-201ENSMUST00000104441 121 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Scgb2b25-ps-201ENSMUST00000121936 307 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC11.27□□□□□ -0.61
Ybx1P62960 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.27□□□□□ -0.61
Ybx1P62960 Gm25872-201ENSMUST00000177784 100 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Gm5210-201ENSMUST00000182150 1010 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Gm8384-201ENSMUST00000190905 704 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Gm43564-201ENSMUST00000196185 211 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Gm43244-201ENSMUST00000196994 1285 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Gm8234-201ENSMUST00000198523 1107 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC11.27□□□□□ -0.61
Ybx1P62960 Gm20735-202ENSMUST00000212387 519 ntTSL 2 BASIC11.27□□□□□ -0.61
Ybx1P62960 Myl6-203ENSMUST00000217776 562 ntTSL 3 BASIC11.27□□□□□ -0.61
Ybx1P62960 Lsm3-201ENSMUST00000040607 743 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.27□□□□□ -0.61
Ybx1P62960 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.27□□□□□ -0.61
Ybx1P62960 Selenbp2-204ENSMUST00000173849 1323 ntTSL 5 BASIC11.27□□□□□ -0.61
Ybx1P62960 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Nit1-203ENSMUST00000111296 1394 ntTSL 5 BASIC11.27□□□□□ -0.61
Ybx1P62960 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Rgs3-202ENSMUST00000084521 3888 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
Ybx1P62960 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Ybx1P62960 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.26□□□□□ -0.61
Ybx1P62960 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Ptpn2-202ENSMUST00000120934 1497 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Ybx1P62960 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Nek1-208ENSMUST00000211256 4810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Gm39117-201ENSMUST00000207692 1569 ntTSL 5 BASIC11.26□□□□□ -0.61
Ybx1P62960 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Gm15625-201ENSMUST00000117617 1093 ntBASIC11.26□□□□□ -0.61
Ybx1P62960 Gm9166-201ENSMUST00000120293 561 ntBASIC11.26□□□□□ -0.61
Ybx1P62960 Gm8152-201ENSMUST00000120842 637 ntBASIC11.26□□□□□ -0.61
Ybx1P62960 Gng5-ps-201ENSMUST00000120931 205 ntBASIC11.26□□□□□ -0.61
Ybx1P62960 Gm5395-201ENSMUST00000121650 915 ntBASIC11.26□□□□□ -0.61
Ybx1P62960 Gm15498-201ENSMUST00000126693 723 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Psme1-208ENSMUST00000174259 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Ybx1P62960 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Ybx1P62960 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC11.26□□□□□ -0.61
Ybx1P62960 Gm13539-202ENSMUST00000211245 552 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Ybx1P62960 Gm18001-201ENSMUST00000212023 688 ntBASIC11.26□□□□□ -0.61
Ybx1P62960 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms