Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC10.38□□□□□ -0.75
Nup43P59235 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Nup43P59235 Gm37264-201ENSMUST00000194916 2192 ntBASIC10.38□□□□□ -0.75
Nup43P59235 AC090962.2-201ENSMUST00000225064 1801 ntBASIC10.38□□□□□ -0.75
Nup43P59235 Slc6a20b-201ENSMUST00000026273 6307 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC10.38□□□□□ -0.75
Nup43P59235 Cit-201ENSMUST00000051704 9514 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Rnft2-201ENSMUST00000117177 4381 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Zmym3-209ENSMUST00000121520 5564 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nup43P59235 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Wipf1-203ENSMUST00000102680 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Itgal-204ENSMUST00000120857 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nup43P59235 Gm11952-201ENSMUST00000121172 821 ntBASIC10.38□□□□□ -0.75
Nup43P59235 Gm13010-201ENSMUST00000140495 828 ntTSL 5 BASIC10.38□□□□□ -0.75
Nup43P59235 Gm14662-201ENSMUST00000145552 734 ntTSL 3 BASIC10.38□□□□□ -0.75
Nup43P59235 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC10.38□□□□□ -0.75
Nup43P59235 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC10.38□□□□□ -0.75
Nup43P59235 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC10.38□□□□□ -0.75
Nup43P59235 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm20471-201ENSMUST00000172793 626 ntTSL 3 BASIC10.38□□□□□ -0.75
Nup43P59235 A430105J06Rik-201ENSMUST00000180869 1275 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.38□□□□□ -0.75
Nup43P59235 Gm28722-201ENSMUST00000187630 1036 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm43037-201ENSMUST00000196808 250 ntBASIC10.38□□□□□ -0.75
Nup43P59235 Gm43084-201ENSMUST00000200696 947 ntBASIC10.38□□□□□ -0.75
Nup43P59235 AC159196.1-201ENSMUST00000225524 377 ntBASIC10.38□□□□□ -0.75
Nup43P59235 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.38□□□□□ -0.75
Nup43P59235 AC125539.1-201ENSMUST00000227423 622 ntBASIC10.38□□□□□ -0.75
Nup43P59235 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nup43P59235 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nup43P59235 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Nup43P59235 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Nup43P59235 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Nup43P59235 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Nup43P59235 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC10.38□□□□□ -0.75
Nup43P59235 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Rpap1-201ENSMUST00000048493 4744 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Nup43P59235 Vwa5b2-202ENSMUST00000096197 4527 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Cln8-201ENSMUST00000027554 6857 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Gm42651-201ENSMUST00000199851 1339 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Gm45165-201ENSMUST00000207763 1631 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Wbp1l-201ENSMUST00000099376 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Gm25063-201ENSMUST00000104666 94 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Scp2-202ENSMUST00000106701 772 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC10.37□□□□□ -0.75
Nup43P59235 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Snord23-201ENSMUST00000116828 109 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC10.37□□□□□ -0.75
Nup43P59235 Gm22442-201ENSMUST00000157256 144 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Dydc1-202ENSMUST00000161837 829 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC10.37□□□□□ -0.75
Nup43P59235 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC10.37□□□□□ -0.75
Nup43P59235 Gm19013-201ENSMUST00000183895 1222 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Gm19014-201ENSMUST00000184828 1189 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Gm29292-201ENSMUST00000186169 766 ntTSL 3 BASIC10.37□□□□□ -0.75
Nup43P59235 Gm28923-201ENSMUST00000187755 322 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Gm29410-201ENSMUST00000188383 694 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 A930036K24Rik-201ENSMUST00000194146 1200 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Gm5100-201ENSMUST00000195631 589 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC10.37□□□□□ -0.75
Nup43P59235 4930478P22Rik-202ENSMUST00000201921 723 ntTSL 3 BASIC10.37□□□□□ -0.75
Nup43P59235 Gm42655-201ENSMUST00000202782 1134 ntBASIC10.37□□□□□ -0.75
Nup43P59235 Gm44814-201ENSMUST00000207018 434 ntBASIC10.37□□□□□ -0.75
Nup43P59235 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Nup43P59235 Gm6145-204ENSMUST00000210902 1266 ntTSL 5 BASIC10.37□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms